RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 HADHQ16836 314 aaKnown RBP11.03□□□□□ -0.64
PABPC1-224ENST00000610907 KCTD19Q17RG1 926 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-224ENST00000610907 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 IZUMO3Q5VZ72 239 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 USP50Q70EL3 339 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-224ENST00000610907 TRIM50Q86XT4 487 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 NT5DC4Q86YG4 428 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 TTC13Q8NBP0 860 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 ATXN2LQ8WWM7 1075 aaKnown RBP11.03□□□□□ -0.64
PABPC1-224ENST00000610907 TFAP2BQ92481 460 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 NLRP4Q96MN2 994 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 TTC25Q96NG3 672 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 MCEEQ96PE7 176 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 ZNF317Q96PQ6 595 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-224ENST00000610907 SELENOSQ9BQE4 189 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 ACTR5Q9H9F9 607 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-224ENST00000610907 PPCSQ9HAB8 311 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 LGALS13Q9UHV8 139 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 PNMA3Q9UL41 463 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 KIAA1257Q9ULG3 409 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 IVNS1ABPQ9Y6Y0 642 aa11.03□□□□□ -0.64
PABPC1-224ENST00000610907 UNCXA6NJT0 531 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 F8VP50 259 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 DNALI1O14645 258 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-224ENST00000610907 CDH16O75309 829 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 STAU1O95793 577 aaKnown RBP11.02□□□□□ -0.65
PABPC1-224ENST00000610907 KRT3P12035 628 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 RDXP35241 583 aaKnown RBP11.02□□□□□ -0.65
PABPC1-224ENST00000610907 CDKN2BP42772 138 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 VCPP55072 806 aaKnown RBP11.02□□□□□ -0.65
PABPC1-224ENST00000610907 CCNA1P78396 465 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 ZNF252P-AS1Q0IIN9 211 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 MORF4L2Q15014 288 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 LLGL1Q15334 1064 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 CNGA2Q16280 664 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 KYNUQ16719 465 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 TTC31Q49AM3 519 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-224ENST00000610907 EEF1DP3Q658K8 133 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 MFSD7Q6UXD7 560 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 CCDC121Q6ZUS5 278 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 ANKS1BQ7Z6G8 1248 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 PCGF5Q86SE9 256 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 EXOC3L1Q86VI1 746 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 FBXO16Q8IX29 292 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-224ENST00000610907 MICALL1Q8N3F8 863 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 ALLCQ8N6M5 410 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 MDM1Q8TC05 714 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 ARHGEF2Q92974 986 aaKnown RBP11.02□□□□□ -0.65
PABPC1-224ENST00000610907 EMID1Q96A84 441 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-224ENST00000610907 CDCA5Q96FF9 252 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 CLMNQ96JQ2 1002 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 CFAP57Q96MR6 1250 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 DDX23Q9BUQ8 820 aaKnown RBP11.02□□□□□ -0.65
PABPC1-224ENST00000610907 PHACTR1Q9C0D0 580 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 MIS12Q9H081 205 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 NSRP1Q9H0G5 558 aaKnown RBP11.02□□□□□ -0.65
PABPC1-224ENST00000610907 VTA1Q9NP79 307 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 NINJ2Q9NZG7 142 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 ZNF148Q9UQR1 794 aa11.02□□□□□ -0.65
PABPC1-224ENST00000610907 RBM47A0AV96 593 aaKnown RBP11.01□□□□□ -0.65
PABPC1-224ENST00000610907 SMIM23A6NLE4 172 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 ANKRD65E5RJM6 399 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 SMAPO00193 183 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 ACSL3O95573 720 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 GH1P01241 217 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 HMGCRP04035 888 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 STAG3L1P0CL83 205 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 SSTR3P32745 418 aaPredicted RBP11.01□□□□□ -0.65
PABPC1-224ENST00000610907 GABRB2P47870 512 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 RAD23BP54727 409 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 ARHGAP1Q07960 439 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 IFT88Q13099 833 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 NR1H3Q13133 447 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 ITIH4Q14624 930 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 TRIP13Q15645 432 aaPredicted RBP11.01□□□□□ -0.65
PABPC1-224ENST00000610907 OASLQ15646 514 aaKnown RBP11.01□□□□□ -0.65
PABPC1-224ENST00000610907 TAZQ16635 292 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 ZNF394Q53GI3 561 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 LACTB2Q53H82 288 aaPredicted RBP11.01□□□□□ -0.65
PABPC1-224ENST00000610907 ZFYVE27Q5T4F4 411 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 DAB2IPQ5VWQ8 1189 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 SCARA3Q6AZY7 606 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 DENND1BQ6P3S1 775 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 PIGWQ7Z7B1 504 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 LINC01465Q8N7H1 131 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 ANKS4BQ8N8V4 417 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 UHMK1Q8TAS1 419 aaKnown RBP11.01□□□□□ -0.65
PABPC1-224ENST00000610907 OPTNQ96CV9 577 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 IFT122Q9HBG6 1241 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 PCDH9Q9HC56 1237 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 SIX4Q9UIU6 781 aa11.01□□□□□ -0.65
PABPC1-224ENST00000610907 TPX2Q9ULW0 747 aaKnown RBP11.01□□□□□ -0.65
PABPC1-224ENST00000610907 GOLGA6L7A0A1B0GV03 622 aa11□□□□□ -0.65
PABPC1-224ENST00000610907 LACTBL1A8MY62 500 aa11□□□□□ -0.65
PABPC1-224ENST00000610907 GPR25O00155 361 aa11□□□□□ -0.65
PABPC1-224ENST00000610907 B4GALT5O43286 388 aa11□□□□□ -0.65
PABPC1-224ENST00000610907 CILPO75339 1184 aa11□□□□□ -0.65
PABPC1-224ENST00000610907 GJB6O95452 261 aa11□□□□□ -0.65
PABPC1-224ENST00000610907 KRT19P08727 400 aa11□□□□□ -0.65
PABPC1-224ENST00000610907 CXCL8P10145 99 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms