RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ACAP3Q96P50 834 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 TWNKQ96RR1 684 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 SEMA4AQ9H3S1 761 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 LRRC4CQ9HCJ2 640 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 SETD4Q9NVD3 440 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 HMGXB4Q9UGU5 601 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 FEZ2Q9UHY8 353 aaPredicted RBP14.41□□□□□ -0.1
NEK3-205ENST00000610828 STRIP2Q9ULQ0 834 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 SHBGP04278 402 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 ATF7P17544 494 aaPredicted RBP14.41□□□□□ -0.1
NEK3-205ENST00000610828 FKBP1BP68106 108 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 NFX1Q12986 1120 aaKnown RBP14.41□□□□□ -0.1
NEK3-205ENST00000610828 KIZQ2M2Z5 673 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 PPP1R15BQ5SWA1 713 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 KAZNQ674X7 775 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 ATL2Q8NHH9 583 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 CXorf38Q8TB03 319 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 HOMER3Q9NSC5 361 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 TJP2Q9UDY2 1190 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 CYTH4Q9UIA0 394 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 NOVA2Q9UNW9 492 aaKnown RBP14.41□□□□□ -0.1
NEK3-205ENST00000610828 AGAP1Q9UPQ3 857 aa14.41□□□□□ -0.1
NEK3-205ENST00000610828 A0A1B0GUA9 196 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 A6NNZ2 444 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 KRT1P04264 644 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 PAEPP09466 180 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 NUDT17P0C025 328 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 KRT10P13645 584 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 P4HA1P13674 534 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 ATICP31939 592 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 TAP1Q03518 808 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 PTPN11Q06124 597 aaPredicted RBP14.4□□□□□ -0.1
NEK3-205ENST00000610828 PIGHQ14442 188 aaPredicted RBP14.4□□□□□ -0.1
NEK3-205ENST00000610828 SLC29A2Q14542 456 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 SLMAPQ14BN4 828 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 KYAT1Q16773 422 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 TUBB8Q3ZCM7 444 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 SLC4A11Q8NBS3 891 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 PPP1R13LQ8WUF5 828 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 HPDLQ96IR7 371 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 RBM41Q96IZ5 413 aaKnown RBP14.4□□□□□ -0.1
NEK3-205ENST00000610828 FAM49AQ9H0Q0 323 aaPredicted RBP14.4□□□□□ -0.1
NEK3-205ENST00000610828 LHX5Q9H2C1 402 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 SYNCQ9H7C4 482 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 WHRNQ9P202 907 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 CILPO75339 1184 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 VPS41P49754 854 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 PPARDQ03181 441 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 PTK6Q13882 451 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 CCNG2Q16589 344 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 EMC10Q5UCC4 262 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 IQSEC1Q6DN90 963 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 SYDE1Q6ZW31 735 aaPredicted RBP14.4□□□□□ -0.1
NEK3-205ENST00000610828 DPH6Q7L8W6 267 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 RCOR2Q8IZ40 523 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 BCAS4Q8TDM0 211 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 ACSF2Q96CM8 615 aaPredicted RBP14.4□□□□□ -0.1
NEK3-205ENST00000610828 SNF8Q96H20 258 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 TMEM176AQ96HP8 235 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 SLITRK1Q96PX8 696 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 FAM129AQ9BZQ8 928 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 ELOVL4Q9GZR5 314 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 LCMT1Q9UIC8 334 aa14.4□□□□□ -0.1
NEK3-205ENST00000610828 DYNC1LI2O43237 492 aaPredicted RBP14.39□□□□□ -0.11
NEK3-205ENST00000610828 KRT3P12035 628 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 HOXD8P13378 290 aaPredicted RBP14.39□□□□□ -0.11
NEK3-205ENST00000610828 RFC1P35251 1148 aaPredicted RBP14.39□□□□□ -0.11
NEK3-205ENST00000610828 ADCY2Q08462 1091 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 PRAMEF19Q5SWL8 479 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 UBAP2Q5T6F2 1119 aaKnown RBP14.39□□□□□ -0.11
NEK3-205ENST00000610828 AGBL2Q5U5Z8 902 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 TXNRD3NBQ6F5E7 133 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 MFSD7Q6UXD7 560 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 ZNF410Q86VK4 478 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 HOOK3Q86VS8 718 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 ARFGAP2Q8N6H7 521 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 UHMK1Q8TAS1 419 aaKnown RBP14.39□□□□□ -0.11
NEK3-205ENST00000610828 FAXDC2Q96IV6 333 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 CPXM1Q96SM3 734 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 DPP3Q9NY33 737 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 CPA4Q9UI42 421 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 C2CD2Q9Y426 696 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 DCDC2CA8MYV0 355 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 TP73O15350 636 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 RARGP13631 454 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 ATF2P15336 505 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 ITIH2P19823 946 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 ADCY8P40145 1251 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 MAGOHP61326 146 aaKnown RBP14.39□□□□□ -0.11
NEK3-205ENST00000610828 PSMC1P62191 440 aaKnown RBP14.39□□□□□ -0.11
NEK3-205ENST00000610828 ZNF365Q70YC5 407 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 KIF12Q96FN5 646 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 HEXIM2Q96MH2 286 aaKnown RBP14.39□□□□□ -0.11
NEK3-205ENST00000610828 VRTNQ9H8Y1 702 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 RSPH14Q9UHP6 348 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 ITGA11Q9UKX5 1188 aa14.39□□□□□ -0.11
NEK3-205ENST00000610828 CITO14578 2027 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 SMIM23A6NLE4 172 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 M0QYV0 167 aa14.38□□□□□ -0.11
NEK3-205ENST00000610828 RIPK2O43353 540 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms