RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ACAP1Q15027 740 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 STILQ15468 1287 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 ZNF394Q53GI3 561 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 C2CD6Q53TS8 623 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 MARCH8Q5T0T0 291 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 DENND2CQ68D51 928 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 DRICH1Q6PGQ1 229 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-206ENST00000609853 SCARA5Q6ZMJ2 495 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 PHLDB2Q86SQ0 1253 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 TMEM192Q8IY95 271 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 WDTC1Q8N5D0 677 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 CCDC89Q8N998 374 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 ZBTB10Q96DT7 871 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 SNF8Q96H20 258 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 TMEM176AQ96HP8 235 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 TSPAN18Q96SJ8 248 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 TMEM109Q9BVC6 243 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 GCOM2Q9BZD3 368 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-206ENST00000609853 ZHX1Q9UKY1 873 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-206ENST00000609853 EFR3BQ9Y2G0 817 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 NRCAMQ92823 1304 aa12.65□□□□□ -0.39
USP6NL-206ENST00000609853 VDRP11473 427 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 HNRNPH2P55795 449 aaKnown RBP12.64□□□□□ -0.39
USP6NL-206ENST00000609853 RPL7AP62424 266 aaKnown RBP12.64□□□□□ -0.39
USP6NL-206ENST00000609853 KRT17Q04695 432 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 PTPN11Q06124 597 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-206ENST00000609853 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 NFX1Q12986 1120 aaKnown RBP12.64□□□□□ -0.39
USP6NL-206ENST00000609853 CNGA2Q16280 664 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 ODF2Q5BJF6 829 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 KCTD16Q68DU8 428 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 LLGL2Q6P1M3 1020 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 LRRC31Q6UY01 552 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 TRMT10CQ7L0Y3 403 aaKnown RBP12.64□□□□□ -0.39
USP6NL-206ENST00000609853 CDR2LQ86X02 465 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-206ENST00000609853 C1orf54Q8WWF1 131 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 HPDLQ96IR7 371 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 CPB2Q96IY4 423 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 MCEEQ96PE7 176 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-206ENST00000609853 POLIQ9UNA4 740 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 USTQ9Y2C2 406 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 PTPN22Q9Y2R2 807 aa12.64□□□□□ -0.39
USP6NL-206ENST00000609853 SMIM35A0A1B0GVV1 85 aa12.63□□□□□ -0.39
USP6NL-206ENST00000609853 EIF3HO15372 352 aaKnown RBP eCLIP12.63□□□□□ -0.39
USP6NL-206ENST00000609853 AXLP30530 894 aa12.63□□□□□ -0.39
USP6NL-206ENST00000609853 SSR1P43307 286 aaKnown RBP12.63□□□□□ -0.39
USP6NL-206ENST00000609853 GABRB2P47870 512 aa12.63□□□□□ -0.39
USP6NL-206ENST00000609853 KCNJ1P48048 391 aa12.63□□□□□ -0.39
USP6NL-206ENST00000609853 CDR1P51861 262 aa12.63□□□□□ -0.39
USP6NL-206ENST00000609853 MYO1EQ12965 1108 aa12.63□□□□□ -0.39
USP6NL-206ENST00000609853 MKRN3Q13064 507 aaKnown RBP12.63□□□□□ -0.39
USP6NL-206ENST00000609853 SLC4A11Q8NBS3 891 aa12.63□□□□□ -0.39
USP6NL-206ENST00000609853 PTPN18Q99952 460 aa12.63□□□□□ -0.39
USP6NL-206ENST00000609853 FRMD8P1Q9BZ68 369 aaPredicted RBP12.63□□□□□ -0.39
USP6NL-206ENST00000609853 STMN4Q9H169 189 aaPredicted RBP12.63□□□□□ -0.39
USP6NL-206ENST00000609853 DPP3Q9NY33 737 aa12.63□□□□□ -0.39
USP6NL-206ENST00000609853 ASIC3Q9UHC3 531 aa12.63□□□□□ -0.39
USP6NL-206ENST00000609853 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 CELF2O95319 508 aaKnown RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 F2P00734 622 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 KRT7P08729 469 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 KRT3P12035 628 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 SSTR3P32745 418 aaPredicted RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 GNGT1P63211 74 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 MAP2K5Q13163 448 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 BYSLQ13895 437 aaKnown RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 HADHQ16836 314 aaKnown RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 KRT71Q3SY84 523 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 MORN1Q5T089 497 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 C6orf118Q5T5N4 469 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 DENND1BQ6P3S1 775 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 SLC27A1Q6PCB7 646 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 ZNF365Q70YC5 407 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 PGM2Q96G03 612 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 SLITRK1Q96PX8 696 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 TRAIPQ9BWF2 469 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 ADAMTS10Q9H324 1103 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 CHST7Q9NS84 486 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 AGAP1Q9UPQ3 857 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 DRG1Q9Y295 367 aaKnown RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 Q9Y3F1 56 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 MBLAC1A4D2B0 266 aaPredicted RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 CSDE1O75534 798 aaKnown RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 ATF2P15336 505 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 PSMC1P62191 440 aaKnown RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 ADCY2Q08462 1091 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 ZNF252P-AS1Q0IIN9 211 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 PTPN20Q4JDL3 420 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 TFDP3Q5H9I0 405 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 NOTUMQ6P988 496 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 SH2D3CQ8N5H7 860 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 NPLOC4Q8TAT6 608 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 ROPN1BQ9BZX4 212 aaPredicted RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 DNAI2Q9GZS0 605 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 SDCBP2Q9H190 292 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 EPB41L4BQ9H329 900 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms