RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 FBRSL1Q9HCM7 1045 aaKnown RBP16.25■□□□□ 0.19
SSBP4-214ENST00000607020 ANKFY1Q9P2R3 1169 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 SFI1A8K8P3 1242 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 LACTBL1A8MY62 500 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 GIPC1O14908 333 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 APBB3O95704 486 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 EGFP01133 1207 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 ODC1P11926 461 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 ATF6P18850 670 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 FOSBP53539 338 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 SPAG1Q07617 926 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 TMEM150AQ86TG1 271 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 C11orf74Q86VG3 221 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 OR10T2Q8NGX3 314 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 USP13Q92995 863 aaPredicted RBP16.24■□□□□ 0.19
SSBP4-214ENST00000607020 SMG9Q9H0W8 520 aaKnown RBP16.24■□□□□ 0.19
SSBP4-214ENST00000607020 EBF3Q9H4W6 596 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 TDP1Q9NUW8 608 aa16.24■□□□□ 0.19
SSBP4-214ENST00000607020 PIRO00625 290 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 FAM189A1O60320 539 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 F11P03951 625 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 AVPR1AP37288 418 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 CREB5Q02930 508 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 PPP2R3AQ06190 1150 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 ZNF252P-AS1Q0IIN9 211 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 ZNF268Q14587 947 aaPredicted RBP16.23■□□□□ 0.19
SSBP4-214ENST00000607020 PDGFRLQ15198 375 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 SH3PXD2AQ5TCZ1 1133 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 KRT79Q5XKE5 535 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 CD302Q8IX05 232 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 GATA6Q92908 595 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 HHIPQ96QV1 700 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 SEPT5Q99719 369 aaPredicted RBP16.23■□□□□ 0.19
SSBP4-214ENST00000607020 P2RY13Q9BPV8 354 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 ADAM33Q9BZ11 813 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 POLR3BQ9NW08 1133 aaPredicted RBP16.23■□□□□ 0.19
SSBP4-214ENST00000607020 DSEQ9UL01 958 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 IGF2RP11717 2491 aa16.23■□□□□ 0.19
SSBP4-214ENST00000607020 FASNP49327 2511 aaKnown RBP16.22■□□□□ 0.19
SSBP4-214ENST00000607020 LNP1A1A4G5 178 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 ANO9A1A5B4 782 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 H0YCG3 227 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 CDX4O14627 284 aaPredicted RBP16.22■□□□□ 0.19
SSBP4-214ENST00000607020 PPEF2O14830 753 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 HAPLN1P10915 354 aaPredicted RBP16.22■□□□□ 0.19
SSBP4-214ENST00000607020 HOXB3P14651 431 aaPredicted RBP16.22■□□□□ 0.19
SSBP4-214ENST00000607020 HMGA1P17096 107 aaKnown RBP16.22■□□□□ 0.19
SSBP4-214ENST00000607020 SCP2P22307 547 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 CDC25AP30304 524 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 TNFSF9P41273 254 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 GUCY2FP51841 1108 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 NLRP12P59046 1061 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 GUCY1B3Q02153 619 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 ST3GAL1Q11201 340 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 ACAP1Q15027 740 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 ENOX2Q16206 610 aaKnown RBP16.22■□□□□ 0.19
SSBP4-214ENST00000607020 MGAT5BQ3V5L5 792 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 SLC39A12Q504Y0 691 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 TRIM68Q6AZZ1 485 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 KCNK18Q7Z418 384 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 MON1AQ86VX9 555 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 CCDC26Q8TAB7 109 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 SPPL2BQ8TCT7 592 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 ACDQ96AP0 544 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 C8orf76Q96K31 380 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 MMTAG2Q9BU76 263 aaKnown RBP16.22■□□□□ 0.19
SSBP4-214ENST00000607020 KCND2Q9NZV8 630 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 CCL26Q9Y258 94 aa16.22■□□□□ 0.19
SSBP4-214ENST00000607020 GREB1Q4ZG55 1949 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 LAD1O00515 517 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 KHNYNO15037 678 aaKnown RBP16.21■□□□□ 0.19
SSBP4-214ENST00000607020 DCLK1O15075 740 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 OGTO15294 1046 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 PIGRP01833 764 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 ARSAP15289 507 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 GJA4P35212 333 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 BFSP1Q12934 665 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 FOXC1Q12948 553 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 DMC1Q14565 340 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 TAF12Q16514 161 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 HYIQ5T013 277 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 C9orf57Q5W0N0 161 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 PMS2CLQ68D20 193 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 CC2D1AQ6P1N0 951 aaPredicted RBP16.21■□□□□ 0.19
SSBP4-214ENST00000607020 LRRTM3Q86VH5 581 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 MAB21L3Q8N8X9 362 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 SYT2Q8N9I0 419 aaPredicted RBP16.21■□□□□ 0.19
SSBP4-214ENST00000607020 FBXO18Q8NFZ0 1043 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 GIPC2Q8TF65 315 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 CCSER1Q9C0I3 900 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 RPF1Q9H9Y2 349 aaKnown RBP16.21■□□□□ 0.19
SSBP4-214ENST00000607020 DERAQ9Y315 318 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 SPEGQ15772 3267 aa16.21■□□□□ 0.19
SSBP4-214ENST00000607020 SRRM3A6NNA2 597 aaPredicted RBP16.2■□□□□ 0.18
SSBP4-214ENST00000607020 PRPHP41219 470 aa16.2■□□□□ 0.18
SSBP4-214ENST00000607020 NCKAP1LP55160 1127 aa16.2■□□□□ 0.18
SSBP4-214ENST00000607020 USP39Q53GS9 565 aaKnown RBP16.2■□□□□ 0.18
SSBP4-214ENST00000607020 THEM5Q8N1Q8 247 aa16.2■□□□□ 0.18
SSBP4-214ENST00000607020 RPLP0P6Q8NHW5 317 aa16.2■□□□□ 0.18
SSBP4-214ENST00000607020 EZH1Q92800 747 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms