RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ITGA8P53708 1063 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 IFI35P80217 286 aaPredicted RBP16.82■□□□□ 0.28
CTSA-214ENST00000606788 LONRF1Q17RB8 773 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 MARCH8Q5T0T0 291 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 ILDR2Q71H61 639 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 CATSPER4Q7RTX7 472 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 JPH2Q9BR39 696 aaPredicted RBP16.82■□□□□ 0.28
CTSA-214ENST00000606788 EPB41L4BQ9H329 900 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 MLXIPLQ9NP71 852 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 ZNF148Q9UQR1 794 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 CEP83Q9Y592 693 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 FSCN2O14926 492 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 MMP3P08254 477 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 CD48P09326 243 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 RAD23BP54727 409 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 HUNKP57058 714 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 PHF13Q86YI8 300 aaPredicted RBP16.82■□□□□ 0.28
CTSA-214ENST00000606788 CCDC33Q8N5R6 958 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 C7orf31Q8N865 590 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 PPTC7Q8NI37 304 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 HSPH1Q92598 858 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 PLVAPQ9BX97 442 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 DCLK3Q9C098 648 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 GOLGA2P5Q9HBQ8 144 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 FLRT1Q9NZU1 646 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 TBK1Q9UHD2 729 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 PCYOX1Q9UHG3 505 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 DNPEPQ9ULA0 475 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 SNX9Q9Y5X1 595 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 GRIN2DO15399 1336 aa16.82■□□□□ 0.28
CTSA-214ENST00000606788 LAMA2P24043 3122 aaKnown RBP16.82■□□□□ 0.28
CTSA-214ENST00000606788 TRIM66O15016 1216 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 TSPAN1O60635 241 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 MYBL1P10243 752 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 TMEM132DQ14C87 1099 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 KYNUQ16719 465 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 CYP4F22Q6NT55 531 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 DNAJB3Q8WWF6 145 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 TRIM11Q96F44 468 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 C9orf72Q96LT7 481 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 CTNNAL1Q9UBT7 734 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 TMEM191CA6NGB0 347 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 ERBB2P04626 1255 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 TNFAIP2Q03169 654 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 NFX1Q12986 1120 aaKnown RBP16.81■□□□□ 0.28
CTSA-214ENST00000606788 HIC1Q14526 733 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 CCDC142Q17RM4 750 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 RUFY4Q6ZNE9 571 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 PNMA8AQ86V59 439 aaPredicted RBP16.81■□□□□ 0.28
CTSA-214ENST00000606788 FAM81BQ96LP2 452 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 MTRF1LQ9UGC7 380 aaKnown RBP16.81■□□□□ 0.28
CTSA-214ENST00000606788 TUBGCP4Q9UGJ1 667 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 PDGFRBP09619 1106 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 KRT3P12035 628 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 SLC26A2P50443 739 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 NDST1P52848 882 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 ATP11AP98196 1134 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 C1QBPQ07021 282 aaKnown RBP16.81■□□□□ 0.28
CTSA-214ENST00000606788 ZNF484Q5JVG2 852 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 ZNF365Q70YC5 407 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 UBR7Q8N806 425 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 SLC4A11Q8NBS3 891 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 SEC14L1Q92503 715 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 ZMAT2Q96NC0 199 aaKnown RBP16.81■□□□□ 0.28
CTSA-214ENST00000606788 ACAP3Q96P50 834 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 KATNBL1Q9H079 304 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 NXF3Q9H4D5 531 aaKnown RBP16.81■□□□□ 0.28
CTSA-214ENST00000606788 CALCOCO1Q9P1Z2 691 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 SCINQ9Y6U3 715 aa16.81■□□□□ 0.28
CTSA-214ENST00000606788 A0A0G2JMZ2 1700 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 TRIP11Q15643 1979 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 E7EVH7 732 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 NDUFAB1O14561 156 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 GAS2O43903 313 aaKnown RBP16.8■□□□□ 0.28
CTSA-214ENST00000606788 B4GALT4O60513 344 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 MCCD1P59942 119 aaPredicted RBP16.8■□□□□ 0.28
CTSA-214ENST00000606788 TCEAL1Q15170 157 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 TRIM72Q6ZMU5 477 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 PLEKHH3Q7Z736 793 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 ACOT1Q86TX2 421 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 C2orf69Q8N8R5 385 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 MGARPQ8TDB4 240 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 MORC4Q8TE76 937 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 DPP3Q9NY33 737 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 MKI67P46013 3256 aaKnown RBP16.8■□□□□ 0.28
CTSA-214ENST00000606788 PPFIA4O75335 1185 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 BANF1O75531 89 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 IL1R2P27930 398 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 TMEM121Q9BTD3 319 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 TRIM6Q9C030 488 aaPredicted RBP16.8■□□□□ 0.28
CTSA-214ENST00000606788 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 LOC285556D6RIA3 1793 aa16.8■□□□□ 0.28
CTSA-214ENST00000606788 BHMG1C9JSJ3 638 aaPredicted RBP16.79■□□□□ 0.28
CTSA-214ENST00000606788 PODXLO00592 558 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 EIF3HO15372 352 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTSA-214ENST00000606788 PPFIA2O75334 1257 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 MICAL2O94851 1124 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 MYL3P08590 195 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 ATF2P15336 505 aa16.79■□□□□ 0.28
CTSA-214ENST00000606788 HSPA6P17066 643 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms