RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, human

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1A1-209	ENST00000606299	AP5M1	Q9H0R1	490 aa		10.64	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	GAN	Q9H2C0	597 aa		10.64	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	ANKFY1	Q9P2R3	1169 aa		10.64	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	GPN3	Q9UHW5	284 aa	Predicted RBP	10.64	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	GJD2	Q9UKL4	321 aa		10.64	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	IGKV6-21	A0A0C4DH24	114 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MAPK13	O15264	365 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	N4BP1	O75113	896 aa	Known RBP	10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	PPFIA4	O75335	1185 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	TBC1D8	O95759	1140 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	NFIC	P08651	508 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	HARS	P12081	509 aa	Known RBP	10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	KLRC1	P26715	233 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	ADSS	P30520	456 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	DLG4	P78352	724 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CYP27A1	Q02318	531 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	PPFIA1	Q13136	1202 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	RAPGEF1	Q13905	1077 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	ASIC2	Q16515	512 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MSMP	Q1L6U9	139 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	DEFB115	Q30KQ5	88 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CBWD6	Q4V339	395 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	BRDT	Q58F21	947 aa	Predicted RBP	10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CBWD3	Q5JTY5	395 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CBWD5	Q5RIA9	395 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	SFMBT2	Q5VUG0	894 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	WDR59	Q6PJI9	974 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	REXO1L1P	Q8IX06	675 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	RNF149	Q8NC42	400 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	TMEM174	Q8WUU8	243 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	GATA6	Q92908	595 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	PPP1R16B	Q96T49	567 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	FAM213A	Q9BRX8	229 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	INTS2	Q9H0H0	1204 aa	Known RBP	10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	C2orf40	Q9H1Z8	148 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CCDC86	Q9H6F5	360 aa	Known RBP	10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	GABRQ	Q9UN88	632 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	FHOD1	Q9Y613	1164 aa		10.63	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	THSD7B	Q9C0I4	1608 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	GTPBP10	A4D1E9	387 aa	Known RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	GOLGA6L9	A6NEM1	432 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MAGEB2	O15479	319 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	WNT11	O96014	354 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	PIGR	P01833	764 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	EDN1	P05305	212 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	PRKCB	P05771	671 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MYL3	P08590	195 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CYLC1	P35663	651 aa	Predicted RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	EFNA5	P52803	228 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	LACTB	P83111	547 aa	Predicted RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CYP24A1	Q07973	514 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MEA1	Q16626	185 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	KLHDC7A	Q5VTJ3	777 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CDCA2	Q69YH5	1023 aa	Predicted RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	SLFN12L	Q6IEE8	588 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	GJB7	Q6PEY0	223 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MTHFD1L	Q6UB35	978 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	PLEKHO2	Q8TD55	490 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CCDC127	Q96BQ5	260 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	ZBTB45	Q96K62	511 aa	Predicted RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MSTO1	Q9BUK6	570 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	TARS2	Q9BW92	718 aa	Known RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MRPL4	Q9BYD3	311 aa	Known RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CCDC113	Q9H0I3	377 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	ATXN3L	Q9H3M9	355 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	DEF6	Q9H4E7	631 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	SIX2	Q9NPC8	291 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	PLCB1	Q9NQ66	1216 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	AGO2	Q9UKV8	859 aa	Known RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	AKT3	Q9Y243	479 aa		10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	TDRD15	B5MCY1	1934 aa	Known RBP	10.62	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	ZNF233	A6NK53	670 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	INO80B-WBP1	J3KQ70	363 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	KIF2A	O00139	706 aa	Predicted RBP	10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	TMPRSS2	O15393	492 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	ASAP2	O43150	1006 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	EXTL3	O43909	919 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	NDUFA10	O95299	355 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	PLEK	P08567	350 aa	Predicted RBP	10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	UCHL3	P15374	230 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	TMOD1	P28289	359 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	ADM	P35318	185 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	GCLM	P48507	274 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CPT1A	P50416	773 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MXI1	P50539	228 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	BEX3	Q00994	111 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	ARID5A	Q03989	594 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	PPP3CA	Q08209	521 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	CETN1	Q12798	172 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	KIF22	Q14807	665 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MAPK6	Q16659	721 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	TDRD12	Q587J7	1177 aa	Known RBP	10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	MFSD14C	Q5VZR4	134 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	IQCE	Q6IPM2	695 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	TRIM65	Q6PJ69	517 aa		10.61	□□□□□ -0.71
CSNK1A1-209	ENST00000606299	USP37	Q86T82	979 aa		10.61	□□□□□ -0.71

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