RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 LRPAP1P30533 357 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 MAPK8P45983 427 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 GUCY2FP51841 1108 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 IRX4P78413 519 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 PSMD2Q13200 908 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 NOLC1Q14978 699 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TAF12Q16514 161 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ECM1Q16610 540 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 MGAT5BQ3V5L5 792 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SLC39A12Q504Y0 691 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ARMCX5Q6P1M9 558 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CC2D1AQ6P1N0 951 aaPredicted RBP12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 C11orf74Q86VG3 221 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 DAW1Q8N136 415 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 OR10T2Q8NGX3 314 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 RIN3Q8TB24 985 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 EZH1Q92800 747 aaPredicted RBP12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 USP13Q92995 863 aaPredicted RBP12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 KIF12Q96FN5 646 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ZBTB45Q96K62 511 aaPredicted RBP12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 KMT5AQ9NQR1 393 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 MSRB2Q9Y3D2 182 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 PPEF2O14830 753 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SLC16A4O15374 487 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 HIP1RO75146 1068 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TOM1L1O75674 476 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 OR52Z1P0C646 297 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TYMPP19971 482 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 GJA4P35212 333 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CCT6AP40227 531 aaKnown RBP12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 DHPSP49366 369 aaPredicted RBP12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TUFMP49411 452 aaKnown RBP12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SIM1P81133 766 aaPredicted RBP12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 PDGFRLQ15198 375 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 USP39Q53GS9 565 aaKnown RBP12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ANO7Q6IWH7 933 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 MAB21L3Q8N8X9 362 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 GIPC2Q8TF65 315 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 PIGKQ92643 395 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 COL26A1Q96A83 441 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SLC32A1Q9H598 525 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 HSFX1Q9UBD0 423 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TBX20Q9UMR3 447 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 UBQLN1Q9UMX0 589 aaKnown RBP12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 KIAA1024Q9UPX6 916 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CACNA1EQ15878 2313 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 GREB1Q4ZG55 1949 aa12.78□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ODC1P11926 461 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MUTP22033 750 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 LMAN2Q12907 356 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 STRN3Q13033 797 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TRIM61Q5EBN2 209 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TXNDC8Q6A555 127 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TMEM150AQ86TG1 271 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CPA6Q8N4T0 437 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TTC16Q8NEE8 873 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 EXOC4Q96A65 974 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 DRC1Q96MC2 740 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 KIF9Q9HAQ2 790 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 DDX19AQ9NUU7 478 aaKnown RBP12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TDP1Q9NUW8 608 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ZMYM5Q9UJ78 669 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 LOC400499M0QZD8 3231 aa12.77□□□□□ -0.37
PDLIM1P1-201ENST00000604187 BPTFQ12830 3046 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CLTAP09496 248 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CYP3A5P20815 502 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MATR3P43243 847 aaKnown RBP eCLIP12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 PPP2R3AQ06190 1150 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MAPK7Q13164 816 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TRIM29Q14134 588 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ZNF174Q15697 407 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 C19orf48Q6RUI8 117 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ARMCX6Q7L4S7 300 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TTC30AQ86WT1 665 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 NECAB1Q8N987 351 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CD101Q93033 1021 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SENP8Q96LD8 212 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CNOT6LQ96LI5 555 aaKnown RBP12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 RUSC1Q9BVN2 902 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ECT2Q9H8V3 914 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 PLEKHA5Q9HAU0 1116 aa12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.76□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TTC26A0AVF1 554 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CLDN3O15551 220 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 DDX6P26196 483 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 TNFSF9P41273 254 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SEC13P55735 322 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 NLRP12P59046 1061 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 LILRA4P59901 499 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MCL1Q07820 350 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MTF1Q14872 753 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ZBTB6Q15916 424 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SOWAHCQ53LP3 525 aaPredicted RBP12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 RASSF3Q86WH2 238 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 PROSER1Q86XN7 944 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 MDGA1Q8NFP4 955 aa12.75□□□□□ -0.37
PDLIM1P1-201ENST00000604187 NUSAP1Q9BXS6 441 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms