RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CLTCL1P53675 1640 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 APOA4P06727 396 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 WEE2P0C1S8 567 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 SOAT1P35610 550 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 POU4F1Q01851 419 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 FMR1Q06787 632 aaKnown RBP eCLIP10.01□□□□□ -0.81
CSMD1-217ENST00000602723 RSPH1Q8WYR4 309 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 ERP44Q9BS26 406 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 LRRIQ3A6PVS8 624 aaPredicted RBP10.01□□□□□ -0.81
CSMD1-217ENST00000602723 ZNF839A8K0R7 811 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 HSD17B3P37058 310 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 CENPAP49450 140 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 PDIA5Q14554 519 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 NCF4Q15080 339 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 MMP19Q99542 508 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 KLHL4Q9C0H6 718 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 AGPAT5Q9NUQ2 364 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 HERC5Q9UII4 1024 aaKnown RBP10.01□□□□□ -0.81
CSMD1-217ENST00000602723 E2F7Q96AV8 911 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 C7orf25Q9BPX7 421 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 ECSITQ9BQ95 431 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 SIKE1Q9BRV8 207 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 KIAA0391O15091 583 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 DPYDQ12882 1025 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 PTK6Q13882 451 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 CRYMQ14894 314 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 IPMKQ8NFU5 416 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 RIN2Q8WYP3 895 aaPredicted RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 C19orf60Q96EN9 201 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 C6orf203Q9P0P8 240 aaPredicted RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 SMAPO00193 183 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 PSMC6P62333 389 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 NKX1-1Q15270 411 aaPredicted RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 MROH9Q5TGP6 573 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 CYB5D1Q6P9G0 228 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 DDX53Q86TM3 631 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 ZNF668Q96K58 619 aaPredicted RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 DEPDC7Q96QD5 511 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 TIPINQ9BVW5 301 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 RSAD1Q9HA92 442 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 DCDC2Q9UHG0 476 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 PDZK1P1A8MUH7 402 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 TRAPPC11Q7Z392 1133 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 ALDH8A1Q9H2A2 487 aaPredicted RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 MAP3K20Q9NYL2 800 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 NQO1P15559 274 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 TGM2P21980 687 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 BRD2P25440 801 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 SCUBE1Q8IWY4 988 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 C3orf20Q8ND61 904 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 MDM1Q8TC05 714 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 ISCUQ9H1K1 167 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 STAU2Q9NUL3 570 aaKnown RBP eCLIP10□□□□□ -0.81
CSMD1-217ENST00000602723 GEMIN8Q9NWZ8 242 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 EEF2KO00418 725 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 NMT1P30419 496 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 SCTRP47872 440 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 PPIL6Q8IXY8 311 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 RNF149Q8NC42 400 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 NOA1Q8NC60 698 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 CCSER1Q9C0I3 900 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 PIDD1Q9HB75 910 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 KCND2Q9NZV8 630 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 VPS9D1Q9Y2B5 631 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 TRIM13O60858 407 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 PDGFRAP16234 1089 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 COG2Q14746 738 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 LAYNQ6UX15 382 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 SPATA2LQ8IUW3 424 aaPredicted RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 MUC3BQ9H195 1237 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 SLC26A4O43511 780 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 COMTP21964 271 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 SEC24CP53992 1094 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 MTM1Q13496 603 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 CYP51A1Q16850 503 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 TRIM65Q6PJ69 517 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 RTKN2Q8IZC4 609 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 FAM118BQ9BPY3 351 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 GINS4Q9BRT9 223 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 CELF4Q9BZC1 486 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 CARD9Q9H257 536 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 ACAD9Q9H845 621 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 PCDHA10Q9Y5I2 948 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 SNTNA6NMZ2 147 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 MLNP12872 115 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 PSMA3P25788 255 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 CENPCQ03188 943 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 SUGP1Q8IWZ8 645 aaKnown RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 WDR48Q8TAF3 677 aa10□□□□□ -0.81
CSMD1-217ENST00000602723 ILKAPQ9H0C8 392 aaPredicted RBP10□□□□□ -0.81
CSMD1-217ENST00000602723 ZNF23P17027 643 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 SERPINB5P36952 375 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 LINC00523Q86TU6 105 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 USP38Q8NB14 1042 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 CASP10Q92851 521 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 MAGEB18Q96M61 343 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 VPS33BQ9H267 617 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 KRCC1Q9NPI7 259 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-217ENST00000602723 KRT84Q9NSB2 600 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 GRID1Q9ULK0 1009 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms