RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 SPDEFO95238 335 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 GPANK1O95872 356 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 AHSGP02765 367 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 EGR2P11161 476 aaPredicted RBP3.56□□□□□ -1.84
SGMS1-207ENST00000602619 KCNA2P16389 499 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 EN2P19622 333 aaPredicted RBP3.56□□□□□ -1.84
SGMS1-207ENST00000602619 ZEB1P37275 1124 aaPredicted RBP3.56□□□□□ -1.84
SGMS1-207ENST00000602619 TOB1P50616 345 aaPredicted RBP3.56□□□□□ -1.84
SGMS1-207ENST00000602619 BLOC1S1P78537 153 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 HSD11B2P80365 405 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 TIGD2Q4W5G0 525 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 ARHGAP29Q52LW3 1261 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 KRT78Q8N1N4 520 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 C9orf106Q8NAJ2 232 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 FAM98AQ8NCA5 519 aaKnown RBP3.56□□□□□ -1.84
SGMS1-207ENST00000602619 IL31RAQ8NI17 732 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 SCARB1Q8WTV0 552 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 CNPPD1Q9BV87 410 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 ZMAT3Q9HA38 289 aaKnown RBP3.56□□□□□ -1.84
SGMS1-207ENST00000602619 GALNT9Q9HCQ5 603 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 PIH1D1Q9NWS0 290 aaKnown RBP3.56□□□□□ -1.84
SGMS1-207ENST00000602619 RNF181Q9P0P0 153 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 USP25Q9UHP3 1055 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 PAXBP1Q9Y5B6 917 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.56□□□□□ -1.84
SGMS1-207ENST00000602619 AATKQ6ZMQ8 1374 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 CCDC195A0A1B0GUA6 201 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 PIPSLA2A3N6 862 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 ZNF785A8K8V0 405 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 ISM1B1AKI9 464 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 PROM1O43490 865 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 LPXNO60711 386 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 SUN1O94901 812 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 THP07101 528 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 PIM1P11309 404 aaPredicted RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 HDCP19113 662 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 ANXA11P50995 505 aaKnown RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 VAV2P52735 878 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 ZNF135P52742 658 aaPredicted RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 CACNB3P54284 484 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 SOX8P57073 446 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 FAM193AP78312 1265 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 EXOSC9Q06265 439 aaKnown RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 ZNF844Q08AG5 666 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 SEMA5AQ13591 1074 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 HLXQ14774 488 aaPredicted RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 POLD3Q15054 466 aaPredicted RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 CNN3Q15417 329 aaKnown RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 APOA5Q6Q788 366 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 CCAR1Q8IX12 1150 aaKnown RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 LNX2Q8N448 690 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 FAM109AQ8N4B1 249 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 CELF5Q8N6W0 485 aaKnown RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 MORC4Q8TE76 937 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 TNPO1Q92973 898 aaKnown RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 TTC17Q96AE7 1141 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 LRIG1Q96JA1 1093 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 MSLNLQ96KJ4 702 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 COQ10AQ96MF6 247 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 NT5C1BQ96P26 610 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 SPATA5L1Q9BVQ7 753 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 SARS2Q9NP81 518 aaKnown RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 SYBUQ9NX95 663 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 RNF7Q9UBF6 113 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 AGAP1Q9UPQ3 857 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 INSL6Q9Y581 213 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 PCDHA1Q9Y5I3 950 aa3.55□□□□□ -1.84
SGMS1-207ENST00000602619 EPN1Q9Y6I3 576 aaPredicted RBP3.55□□□□□ -1.84
SGMS1-207ENST00000602619 FRMPD2Q68DX3 1309 aaPredicted RBP3.54□□□□□ -1.84
SGMS1-207ENST00000602619 A0A087WWL8 130 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 HMGB1P1B2RPK0 211 aaPredicted RBP3.54□□□□□ -1.84
SGMS1-207ENST00000602619 GOLIM4O00461 696 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 SOAT2O75908 522 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 NDUFA10O95299 355 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 FOSP01100 380 aaPredicted RBP3.54□□□□□ -1.84
SGMS1-207ENST00000602619 GNAI2P04899 355 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 SRGNP10124 158 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 GNALP38405 381 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 VIPR2P41587 438 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 WNT3P56703 355 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 TBX4P57082 545 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 MXRA7P84157 204 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 GUCY1B3Q02153 619 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 RESTQ13127 1097 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 PRR16Q569H4 304 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 KHDC1LQ5JSQ8 128 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 ABHD17BQ5VST6 288 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 KIAA0895LQ68EN5 471 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 CCSAPQ6IQ19 270 aaPredicted RBP3.54□□□□□ -1.84
SGMS1-207ENST00000602619 TAPT1Q6NXT6 567 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 CLNKQ7Z7G1 428 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 USP37Q86T82 979 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 COL23A1Q86Y22 540 aaPredicted RBP3.54□□□□□ -1.84
SGMS1-207ENST00000602619 WDR75Q8IWA0 830 aaKnown RBP3.54□□□□□ -1.84
SGMS1-207ENST00000602619 EXOC8Q8IYI6 725 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 SH2D3CQ8N5H7 860 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 FAM156AQ8NDB6 213 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 FBXO41Q8TF61 875 aa3.54□□□□□ -1.84
SGMS1-207ENST00000602619 LRTOMTQ8WZ04 291 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms