RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 LONP2Q86WA8 852 aa19.24■□□□□ 0.67
SHKBP1-227ENST00000602011 GPIHBP1Q8IV16 184 aa19.24■□□□□ 0.67
SHKBP1-227ENST00000602011 CACTINQ8WUQ7 758 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-227ENST00000602011 ZNF560Q96MR9 790 aa19.24■□□□□ 0.67
SHKBP1-227ENST00000602011 MKNK1Q9BUB5 465 aa19.24■□□□□ 0.67
SHKBP1-227ENST00000602011 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-227ENST00000602011 KPNA7A9QM74 516 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 PPEF2O14830 753 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 HOXC13P31276 330 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 CTHP32929 405 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 TXLNAP40222 546 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 SATB1Q01826 763 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 DMWDQ09019 674 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 ALCAMQ13740 583 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 ITPRIPL2Q3MIP1 535 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 PRR23BQ6ZRT6 265 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 OR10T2Q8NGX3 314 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 SPATA18Q8TC71 538 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 POMGNT1Q8WZA1 660 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 RSPRY1Q96DX4 576 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 SEPT5Q99719 369 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 PYM1Q9BRP8 204 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 PCDHB13Q9Y5F0 798 aa19.23■□□□□ 0.67
SHKBP1-227ENST00000602011 PDCD11Q14690 1871 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 KMT2BQ9UMN6 2715 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 CCDC163A0A0D9SF12 145 aa19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 SLC38A8A6NNN8 435 aa19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 ANKRD63C9JTQ0 380 aa19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 ATG13O75143 517 aa19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 HAPLN1P10915 354 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 TSPY1Q01534 308 aa19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 SRSF5Q13243 272 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 SIM2Q14190 667 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 GAS6Q14393 721 aa19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 SV2BQ7L1I2 683 aa19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 KIF9Q9HAQ2 790 aa19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 PCDHB5Q9Y5E4 795 aa19.22■□□□□ 0.67
SHKBP1-227ENST00000602011 CSH1P0DML2 217 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 CSH2P0DML3 217 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 AVPR1AP37288 418 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 SOX9P48436 509 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 ZC2HC1CQ53FD0 456 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 CMTM8Q8IZV2 173 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 TMEM86AQ8N2M4 240 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 ACCSQ96QU6 501 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 TMEM209Q96SK2 561 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 ACBD6Q9BR61 282 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 STRA6Q9BX79 667 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 MRPL44Q9H9J2 332 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 IL21Q9HBE4 155 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 ABCB6Q9NP58 842 aa19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 RBM12Q9NTZ6 932 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 UXTQ9UBK9 157 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 SRPRBQ9Y5M8 271 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-227ENST00000602011 KIAA0391O15091 583 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 PPP1R37O75864 691 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 GARTP22102 1010 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 RPL10AP62906 217 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 CCINQ13939 588 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 WDR44Q5JSH3 913 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 STXBP5Q5T5C0 1151 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 RRAGBQ5VZM2 374 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 WSCD1Q658N2 575 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 LRRC52Q8N7C0 313 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 TTC8Q8TAM2 541 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 NETO1Q8TDF5 533 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 LRRC15Q8TF66 581 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 LEO1Q8WVC0 666 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 LRRC3BQ96PB8 259 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 SLC46A2Q9BY10 475 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 OLFML3Q9NRN5 406 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 GTSE1Q9NYZ3 720 aa19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 MORC2Q9Y6X9 1032 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-227ENST00000602011 CHURC1-FNTBB4DL54 471 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 ATF6P18850 670 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 FNTBP49356 437 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 GRSF1Q12849 480 aaKnown RBP eCLIP19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 ZNF268Q14587 947 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 CSRP2Q16527 193 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 L1TD1Q5T7N2 865 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 CRELD2Q6UXH1 353 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 CCDC73Q6ZRK6 1079 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 LRRTM3Q86VH5 581 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 WDR5BQ86VZ2 330 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 TTC9BQ8N6N2 239 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 DDX1Q92499 740 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 MRPS31Q92665 395 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 LPIN3Q9BQK8 851 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 FAM83CQ9BQN1 747 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 TMEM206Q9H813 350 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 GKN1Q9NS71 199 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 TDP1Q9NUW8 608 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 C2orf42Q9NWW7 574 aa19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 R3HCC1Q9Y3T6 440 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 MAP1BP46821 2468 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-227ENST00000602011 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 K7ESF4 209 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 HRO43593 1189 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 HUS1O60921 280 aa19.18■□□□□ 0.66
SHKBP1-227ENST00000602011 SOAT2O75908 522 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms