RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 RPF1Q9H9Y2 349 aaKnown RBP18.17■□□□□ 0.5
USE1-208ENST00000600970 VPS45Q9NRW7 570 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 TCHHQ07283 1943 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 NPHP3-ACAD11A0A0J9YXS1 232 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 LAD1O00515 517 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 OGTO15294 1046 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 RNF40O75150 1001 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 EGFP01133 1207 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 PAX3P23760 479 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 LIG4P49917 911 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 SLC12A3P55017 1021 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 PLK5Q496M5 336 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 HYIQ5T013 277 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 C9orf57Q5W0N0 161 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 RNF43Q68DV7 783 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 DTHD1Q6ZMT9 781 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 FAM212AQ96EL1 285 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 DUSP15Q9H1R2 295 aaPredicted RBP18.16■□□□□ 0.5
USE1-208ENST00000600970 FBRSL1Q9HCM7 1045 aaKnown RBP18.16■□□□□ 0.5
USE1-208ENST00000600970 LIMCH1Q9UPQ0 1083 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 CCL26Q9Y258 94 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 KIAA1549LQ6ZVL6 1849 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 CHD8Q9HCK8 2581 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 MYO16Q9Y6X6 1858 aa18.16■□□□□ 0.5
USE1-208ENST00000600970 SCN1AP35498 2009 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 H0YCG3 227 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 PIRO00625 290 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 PROS1P07225 676 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 HMGN5P82970 282 aaKnown RBP18.15■□□□□ 0.5
USE1-208ENST00000600970 TAF12Q16514 161 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 TCEAL6Q6IPX3 200 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 PSAPL1Q6NUJ1 521 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 TMEM150AQ86TG1 271 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 MAB21L3Q8N8X9 362 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 FAM184AQ8NB25 1140 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 KCNN1Q92952 543 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 TCEAL3Q969E4 200 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 HHIPQ96QV1 700 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 PLIN2Q99541 437 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 LARSQ9P2J5 1176 aaKnown RBP18.15■□□□□ 0.5
USE1-208ENST00000600970 ZMYM5Q9UJ78 669 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 LAMA1P25391 3075 aa18.15■□□□□ 0.5
USE1-208ENST00000600970 SDK1Q7Z5N4 2213 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 ANO9A1A5B4 782 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 F11P03951 625 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 HAPLN1P10915 354 aaPredicted RBP18.14■□□□□ 0.49
USE1-208ENST00000600970 ARSAP15289 507 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 AVPR1AP37288 418 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 GALK1P51570 392 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 ARSHQ5FYA8 562 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 LRRTM3Q86VH5 581 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 RIN3Q8TB24 985 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 SPPL2BQ8TCT7 592 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 C2orf15Q8WU43 125 aaKnown RBP18.14■□□□□ 0.49
USE1-208ENST00000600970 USP13Q92995 863 aaPredicted RBP18.14■□□□□ 0.49
USE1-208ENST00000600970 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.14■□□□□ 0.49
USE1-208ENST00000600970 TDP1Q9NUW8 608 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 KCND2Q9NZV8 630 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 CPSF3Q9UKF6 684 aaKnown RBP18.14■□□□□ 0.49
USE1-208ENST00000600970 DSEQ9UL01 958 aa18.14■□□□□ 0.49
USE1-208ENST00000600970 A0A0B4J269 797 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 HNRNPDLO14979 420 aaKnown RBP18.13■□□□□ 0.49
USE1-208ENST00000600970 PIGRP01833 764 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 NFICP08651 508 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 PLA2G4BP0C869 781 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 HMGA1P17096 107 aaKnown RBP18.13■□□□□ 0.49
USE1-208ENST00000600970 DRD1P21728 446 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 NMT1P30419 496 aaKnown RBP18.13■□□□□ 0.49
USE1-208ENST00000600970 NLRP12P59046 1061 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 AMPD2Q01433 879 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 BFSP1Q12934 665 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 NAIF1Q69YI7 327 aaPredicted RBP18.13■□□□□ 0.49
USE1-208ENST00000600970 METTL23Q86XA0 190 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 CD302Q8IX05 232 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 KCTD17Q8N5Z5 321 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 EDEM2Q9BV94 578 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 KIF9Q9HAQ2 790 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 TBX20Q9UMR3 447 aa18.13■□□□□ 0.49
USE1-208ENST00000600970 CYB561D2O14569 222 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 DCLK1O15075 740 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 DDX6P26196 483 aaKnown RBP eCLIP18.12■□□□□ 0.49
USE1-208ENST00000600970 CREB5Q02930 508 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 SMARCB1Q12824 385 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 TMEM132DQ14C87 1099 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 ELF2Q15723 593 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 TXNDC8Q6A555 127 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 SLC39A4Q6P5W5 647 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 THEM5Q8N1Q8 247 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 RPLP0P6Q8NHW5 317 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 PYM1Q9BRP8 204 aaKnown RBP18.12■□□□□ 0.49
USE1-208ENST00000600970 MSTO1Q9BUK6 570 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 ABI2Q9NYB9 513 aaPredicted RBP18.12■□□□□ 0.49
USE1-208ENST00000600970 DERAQ9Y315 318 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 FRYQ5TBA9 3013 aa18.12■□□□□ 0.49
USE1-208ENST00000600970 C4orf47A7E2U8 309 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 C1QTNF9BB2RNN3 333 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 GIPC1O14908 333 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 RHOBTB1O94844 696 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 CAVIN2O95810 425 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 C1QTNF9P0C862 333 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms