RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 MMRN2Q9H8L6 949 aa12.48□□□□□ -0.41
CHMP2A-207ENST00000600804 CYP3A43Q9HB55 503 aa12.48□□□□□ -0.41
CHMP2A-207ENST00000600804 TLR9Q9NR96 1032 aa12.48□□□□□ -0.41
CHMP2A-207ENST00000600804 SPG21Q9NZD8 308 aa12.48□□□□□ -0.41
CHMP2A-207ENST00000600804 IFNKQ9P0W0 207 aa12.48□□□□□ -0.41
CHMP2A-207ENST00000600804 APEX2Q9UBZ4 518 aa12.48□□□□□ -0.41
CHMP2A-207ENST00000600804 LZTS1Q9Y250 596 aa12.48□□□□□ -0.41
CHMP2A-207ENST00000600804 DOCK8Q8NF50 2099 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 SPTLC1O15269 473 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 AP5Z1O43299 807 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 TACC1O75410 805 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 TADA2AO75478 443 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 SP100P23497 879 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 TBXAS1P24557 533 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 PBX3P40426 434 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 UBE3AQ05086 875 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 GSE1Q14687 1217 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 SYCP1Q15431 976 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 PTPN21Q16825 1174 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 WDR72Q3MJ13 1102 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 ZNF667Q5HYK9 610 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 SCARA3Q6AZY7 606 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 TMEM184AQ6ZMB5 413 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 DDX53Q86TM3 631 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 TMEM86AQ8N2M4 240 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 PPP2R3CQ969Q6 453 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 CRACR2AQ9BSW2 395 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 BCO2Q9BYV7 579 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 EDEM3Q9BZQ6 932 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 NIF3L1Q9GZT8 377 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 GRPEL1Q9HAV7 217 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 APOBEC3GQ9HC16 384 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 SIX2Q9NPC8 291 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 DSEQ9UL01 958 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 NUB1Q9Y5A7 615 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 FANCMQ8IYD8 2048 aa12.47□□□□□ -0.41
CHMP2A-207ENST00000600804 NOL4O94818 638 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 SLC9A1P19634 815 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 FGFR3P22607 806 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 AVPR2P30518 371 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 ASPAP45381 313 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 TNNC1P63316 161 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 CUL2Q13617 745 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 SPOUT1Q5T280 376 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 KLHDC7AQ5VTJ3 777 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 PLPP4Q5VZY2 271 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 ANKRD54Q6NXT1 300 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 FUT10Q6P4F1 479 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 TMEM173Q86WV6 379 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 VSTM4Q8IW00 320 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 SUGP1Q8IWZ8 645 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 TMEM130Q8N3G9 435 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 TMEM169Q96HH4 297 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 SENP8Q96LD8 212 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 NUP58Q9BVL2 599 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 NAA15Q9BXJ9 866 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 OXCT2Q9BYC2 517 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 TRIM5Q9C035 493 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 TTYH3Q9C0H2 523 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 CHST7Q9NS84 486 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 CACNG4Q9UBN1 327 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 PCDHB8Q9UN66 801 aa12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 PRG3Q9Y2Y8 225 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-207ENST00000600804 MTCL1Q9Y4B5 1905 aaKnown RBP12.46□□□□□ -0.42
CHMP2A-207ENST00000600804 TSC2P49815 1807 aa12.46□□□□□ -0.42
CHMP2A-207ENST00000600804 DOCK6Q96HP0 2047 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 CYB561D2O14569 222 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 GABRDO14764 452 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 GFRA3O60609 400 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 HUS1O60921 280 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 LRRN2O75325 713 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 OAZ2O95190 189 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 SOD2P04179 222 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 ODC1P11926 461 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 UCHL3P15374 230 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 CDC25BP30305 580 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 ZNF75DP51815 510 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 YWHAEP62258 255 aaKnown RBP12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 KRT17Q04695 432 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 INCA1Q0VD86 236 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 MRPL58Q14197 206 aaKnown RBP12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 SOWAHAQ2M3V2 549 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 USP41Q3LFD5 358 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 PHLDB3Q6NSJ2 640 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 LLGL2Q6P1M3 1020 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 UBR7Q8N806 425 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 APPL2Q8NEU8 664 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 MICAL1Q8TDZ2 1067 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 BCL7CQ8WUZ0 217 aaPredicted RBP12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 TATDN2Q93075 761 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 PI4K2AQ9BTU6 479 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 LSM14BQ9BX40 385 aaKnown RBP12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 GANQ9H2C0 597 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 MYO6Q9UM54 1294 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 CNTN6Q9UQ52 1028 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 SNX9Q9Y5X1 595 aa12.45□□□□□ -0.42
CHMP2A-207ENST00000600804 A0A1W2PQJ5 194 aa12.44□□□□□ -0.42
CHMP2A-207ENST00000600804 NT5C1B-RDH14C9J2C7 533 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms