RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 ENO1P06733 434 aaKnown RBP19.31■□□□□ 0.68
UPF1-210ENST00000600689 CNGA1P29973 690 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 KDSRQ06136 332 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 SPDYE2Q495Y8 402 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 ZNF394Q53GI3 561 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 XKR9Q5GH70 373 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 ALYREFQ86V81 257 aaKnown RBP19.31■□□□□ 0.68
UPF1-210ENST00000600689 RHPN2Q8IUC4 686 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 KBTBD2Q8IY47 623 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 PPFIBP2Q8ND30 876 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 IL31RAQ8NI17 732 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 TMEM120AQ9BXJ8 343 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 BGNP21810 368 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 NFX1Q12986 1120 aaKnown RBP19.31■□□□□ 0.68
UPF1-210ENST00000600689 RASIP1Q5U651 963 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 SYDE1Q6ZW31 735 aaPredicted RBP19.31■□□□□ 0.68
UPF1-210ENST00000600689 DEFB132Q7Z7B7 95 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 ENDOVQ8N8Q3 282 aaKnown RBP19.31■□□□□ 0.68
UPF1-210ENST00000600689 FAM111AQ96PZ2 611 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 BTBD10Q9BSF8 475 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 DENND3A2RUS2 1198 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 H3BRJ5 948 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 CCDC22O60826 627 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 TNNI1P19237 187 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 KLRC2P26717 231 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 RARRES1P49788 294 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 KLF1Q13351 362 aaPredicted RBP19.31■□□□□ 0.68
UPF1-210ENST00000600689 ALCAMQ13740 583 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 SMTNL2Q2TAL5 461 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 ANKRD22Q5VYY1 191 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 TMEM270Q6UE05 265 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 C3orf62Q6ZUJ4 267 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 CPXCR1Q8N123 301 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 PYROXD1Q8WU10 500 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 GBP5Q96PP8 586 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 MANSC1Q9H8J5 431 aa19.31■□□□□ 0.68
UPF1-210ENST00000600689 ZNF395Q9H8N7 513 aaPredicted RBP19.31■□□□□ 0.68
UPF1-210ENST00000600689 SMG5Q9UPR3 1016 aaKnown RBP19.31■□□□□ 0.68
UPF1-210ENST00000600689 KIF13BQ9NQT8 1826 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 FAM237BA0A1B0GVD1 139 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 DNALI1O14645 258 aaPredicted RBP19.3■□□□□ 0.68
UPF1-210ENST00000600689 PROSCO94903 275 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 PSMG1O95456 288 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 ITGB5P18084 799 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 UGCGQ16739 394 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 MSS51Q4VC12 460 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 POTEAQ6S8J7 498 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 NLRX1Q86UT6 975 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 BBOF1Q8ND07 529 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 CFAP61Q8NHU2 1237 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.3■□□□□ 0.68
UPF1-210ENST00000600689 TSSK1BQ9BXA7 367 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 TRIM55Q9BYV6 548 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 PSMC3IPQ9P2W1 217 aaPredicted RBP19.3■□□□□ 0.68
UPF1-210ENST00000600689 RGS17Q9UGC6 210 aaPredicted RBP19.3■□□□□ 0.68
UPF1-210ENST00000600689 ACTL7BQ9Y614 415 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 HARSP12081 509 aaKnown RBP19.3■□□□□ 0.68
UPF1-210ENST00000600689 SLC45A4Q5BKX6 768 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 C1orf112Q9NSG2 853 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 TAS2R1Q9NYW7 299 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 UBE4BO95155 1302 aa19.3■□□□□ 0.68
UPF1-210ENST00000600689 C2CD2LO14523 706 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 PGM1P36871 562 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 CENPCQ03188 943 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 CCDC62Q6P9F0 684 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 NSL1Q96IY1 281 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 PAFAH2Q99487 392 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 IVNS1ABPQ9Y6Y0 642 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 KAT6AQ92794 2004 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 MAP3K7O43318 606 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 TYROBPO43914 113 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 EGFRP00533 1210 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 MYL2P10916 166 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 GPX6P59796 221 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 ROR2Q01974 943 aaKnown RBP19.29■□□□□ 0.68
UPF1-210ENST00000600689 CTC1Q2NKJ3 1217 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 OR52E8Q6IFG1 317 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 CENPUQ71F23 418 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 RTKN2Q8IZC4 609 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 AGBL1Q96MI9 1066 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 STRA6Q9BX79 667 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 KCNH7Q9NS40 1196 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 LRCH1Q9Y2L9 728 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 PCDHB4Q9Y5E5 795 aa19.29■□□□□ 0.68
UPF1-210ENST00000600689 B2RBV5 119 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 F8VP50 259 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 HNRNPDLO14979 420 aaKnown RBP19.28■□□□□ 0.68
UPF1-210ENST00000600689 MAGEB2O15479 319 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 PRPF4O43172 522 aaKnown RBP eCLIP19.28■□□□□ 0.68
UPF1-210ENST00000600689 LIASO43766 372 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 UNGP13051 313 aaPredicted RBP19.28■□□□□ 0.68
UPF1-210ENST00000600689 SLC34A1Q06495 639 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 TCEAL1Q15170 157 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 KCNT1Q5JUK3 1230 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 PALM2Q8IXS6 379 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 HIPK4Q8NE63 616 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 MECRQ9BV79 373 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 G3BP2Q9UN86 482 aaKnown RBP19.28■□□□□ 0.68
UPF1-210ENST00000600689 CHMP2BQ9UQN3 213 aa19.28■□□□□ 0.68
UPF1-210ENST00000600689 UMODL1Q5DID0 1318 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms