RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 WARSP23381 471 aaKnown RBP16.3■□□□□ 0.2
LIG1-219ENST00000600055 PIK3CAP42336 1068 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 LHX1P48742 406 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 CDH8P55286 799 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 MYL7Q01449 175 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 ENPEPQ07075 957 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 DCAF17Q5H9S7 520 aaPredicted RBP16.3■□□□□ 0.2
LIG1-219ENST00000600055 SCARA5Q6ZMJ2 495 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 RTL10Q7L3V2 364 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 FILIP1Q7Z7B0 1213 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 DCP1BQ8IZD4 617 aaKnown RBP16.3■□□□□ 0.2
LIG1-219ENST00000600055 TAS1R2Q8TE23 839 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 MED15Q96RN5 788 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 ACBD6Q9BR61 282 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 SMYD3Q9H7B4 428 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 VRTNQ9H8Y1 702 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 TMEM8AQ9HCN3 771 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 MAFFQ9ULX9 164 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 YIPF1Q9Y548 306 aa16.3■□□□□ 0.2
LIG1-219ENST00000600055 C2orf16Q68DN1 1984 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 POU2F2P09086 479 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 RAP1GAPP47736 663 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 PSMC1P62191 440 aaKnown RBP16.29■□□□□ 0.2
LIG1-219ENST00000600055 TSPY1Q01534 308 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 SGSM1Q2NKQ1 1148 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 ZNF667Q5HYK9 610 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 INTS6LQ5JSJ4 861 aaKnown RBP16.29■□□□□ 0.2
LIG1-219ENST00000600055 TCERG1LQ5VWI1 586 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 GET4Q7L5D6 327 aaPredicted RBP16.29■□□□□ 0.2
LIG1-219ENST00000600055 RNF135Q8IUD6 432 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 OR6B3Q8NGW1 331 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 SPATA18Q8TC71 538 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 CEP63Q96MT8 703 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 MYADMQ96S97 322 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 PKMYT1Q99640 499 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 LPIN3Q9BQK8 851 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 SDCBP2Q9H190 292 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 ABI2Q9NYB9 513 aaPredicted RBP16.29■□□□□ 0.2
LIG1-219ENST00000600055 CEP72Q9P209 647 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 ARMCX3Q9UH62 379 aaPredicted RBP16.29■□□□□ 0.2
LIG1-219ENST00000600055 GTF3C4Q9UKN8 822 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 NR2E1Q9Y466 385 aa16.29■□□□□ 0.2
LIG1-219ENST00000600055 MYBPHLA2RUH7 354 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 TACC1O75410 805 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 ASS1P00966 412 aaKnown RBP16.28■□□□□ 0.2
LIG1-219ENST00000600055 FSHRP23945 695 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 PCSK1P29120 753 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 GTF2H1P32780 548 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 GNL1P36915 607 aaPredicted RBP16.28■□□□□ 0.2
LIG1-219ENST00000600055 DPCR1Q3MIW9 517 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 MGAT5BQ3V5L5 792 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 CCDC40Q4G0X9 1142 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 CBWD6Q4V339 395 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 CBWD3Q5JTY5 395 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 CBWD5Q5RIA9 395 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 KRT39Q6A163 491 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 FOXR2Q6PJQ5 311 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 HS6ST3Q8IZP7 471 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 TDRD5Q8NAT2 981 aaKnown RBP16.28■□□□□ 0.2
LIG1-219ENST00000600055 MLKLQ8NB16 471 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 ITFG1Q8TB96 612 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 SEPT5Q99719 369 aaPredicted RBP16.28■□□□□ 0.2
LIG1-219ENST00000600055 SYT15Q9BQS2 421 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 CORO1BQ9BR76 489 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 SRRTQ9BXP5 876 aaKnown RBP16.28■□□□□ 0.2
LIG1-219ENST00000600055 DNAJC25Q9H1X3 360 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 SNX25Q9H3E2 840 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 DPEP3Q9H4B8 488 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 APOBEC3GQ9HC16 384 aaKnown RBP16.28■□□□□ 0.2
LIG1-219ENST00000600055 CRTAC1Q9NQ79 661 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 RWDD2AQ9UIY3 292 aa16.28■□□□□ 0.2
LIG1-219ENST00000600055 NRG2O14511 850 aaPredicted RBP16.27■□□□□ 0.2
LIG1-219ENST00000600055 RHOP08100 348 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 PTPN2P17706 415 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 GBP2P32456 591 aaPredicted RBP16.27■□□□□ 0.2
LIG1-219ENST00000600055 MXI1P50539 228 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 NLRP12P59046 1061 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 SLC5A9Q2M3M2 681 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 PABPC1LQ4VXU2 614 aaKnown RBP16.27■□□□□ 0.2
LIG1-219ENST00000600055 OTOP3Q7RTS5 596 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 FRMD5Q7Z6J6 570 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 TAF4BQ92750 862 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 SLC35C1Q96A29 364 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 METTL14Q9HCE5 456 aaKnown RBP16.27■□□□□ 0.2
LIG1-219ENST00000600055 LIMD1Q9UGP4 676 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 MUTYHQ9UIF7 546 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 CDH9Q9ULB4 789 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 USTQ9Y2C2 406 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 PCDHB5Q9Y5E4 795 aa16.27■□□□□ 0.2
LIG1-219ENST00000600055 STX10O60499 249 aa16.26■□□□□ 0.19
LIG1-219ENST00000600055 FAM163BP0C2L3 166 aa16.26■□□□□ 0.19
LIG1-219ENST00000600055 HAPLN1P10915 354 aaPredicted RBP16.26■□□□□ 0.19
LIG1-219ENST00000600055 CYP2F1P24903 491 aa16.26■□□□□ 0.19
LIG1-219ENST00000600055 ASPAP45381 313 aa16.26■□□□□ 0.19
LIG1-219ENST00000600055 ALDH1A3P47895 512 aa16.26■□□□□ 0.19
LIG1-219ENST00000600055 GPR15P49685 360 aa16.26■□□□□ 0.19
LIG1-219ENST00000600055 NOP14P78316 857 aaKnown RBP16.26■□□□□ 0.19
LIG1-219ENST00000600055 SMARCB1Q12824 385 aa16.26■□□□□ 0.19
LIG1-219ENST00000600055 FAM171BQ6P995 826 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms