RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 CEP72Q9P209 647 aa30.21■■■□□ 2.43
SSBP4-206ENST00000599699 SOAT2O75908 522 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 PMS1P54277 932 aaKnown RBP30.2■■■□□ 2.43
SSBP4-206ENST00000599699 LRRC63Q05C16 580 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 MORC3Q14149 939 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 CLEC17AQ6ZS10 378 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 SPPL2BQ8TCT7 592 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 GBP4Q96PP9 640 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 XYLT2Q9H1B5 865 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 SNX25Q9H3E2 840 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 MMRN2Q9H8L6 949 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 EPS15L1Q9UBC2 864 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 CDH7Q9ULB5 785 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 PCDHB5Q9Y5E4 795 aa30.2■■■□□ 2.43
SSBP4-206ENST00000599699 TRIM49BA6NDI0 452 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 FAM86C2PA6NEL3 165 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 GABRDO14764 452 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 VNN1O95497 513 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 STAU1O95793 577 aaKnown RBP30.19■■■□□ 2.42
SSBP4-206ENST00000599699 LAMP2P13473 410 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 CD44P16070 742 aaKnown RBP30.19■■■□□ 2.42
SSBP4-206ENST00000599699 CCNE1P24864 410 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 TUFMP49411 452 aaKnown RBP30.19■■■□□ 2.42
SSBP4-206ENST00000599699 ZXDAP98168 799 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 FKBP3Q00688 224 aaKnown RBP30.19■■■□□ 2.42
SSBP4-206ENST00000599699 NFE2Q16621 373 aaPredicted RBP30.19■■■□□ 2.42
SSBP4-206ENST00000599699 ZACNQ401N2 412 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 INTS6LQ5JSJ4 861 aaKnown RBP30.19■■■□□ 2.42
SSBP4-206ENST00000599699 C1orf220Q5T0J3 134 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 CYP4A22Q5TCH4 519 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 PDZD4Q76G19 769 aaPredicted RBP30.19■■■□□ 2.42
SSBP4-206ENST00000599699 SV2AQ7L0J3 742 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 LIMS2Q7Z4I7 341 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 FAM200AQ8TCP9 573 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 KBTBD7Q8WVZ9 684 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 ING5Q8WYH8 240 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 EDAQ92838 391 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 MKNK1Q9BUB5 465 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 TMLHEQ9NVH6 421 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 HSFX1Q9UBD0 423 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 SORCS3Q9UPU3 1222 aa30.19■■■□□ 2.42
SSBP4-206ENST00000599699 HCRTO43612 131 aa30.18■■■□□ 2.42
SSBP4-206ENST00000599699 PDGFRBP09619 1106 aa30.18■■■□□ 2.42
SSBP4-206ENST00000599699 WARSP23381 471 aaKnown RBP30.18■■■□□ 2.42
SSBP4-206ENST00000599699 PIK3CAP42336 1068 aa30.18■■■□□ 2.42
SSBP4-206ENST00000599699 GCLMP48507 274 aa30.18■■■□□ 2.42
SSBP4-206ENST00000599699 MTMR3Q13615 1198 aa30.18■■■□□ 2.42
SSBP4-206ENST00000599699 ZNF667Q5HYK9 610 aa30.18■■■□□ 2.42
SSBP4-206ENST00000599699 FGF13Q92913 245 aa30.18■■■□□ 2.42
SSBP4-206ENST00000599699 MRPL45Q9BRJ2 306 aaKnown RBP30.18■■■□□ 2.42
SSBP4-206ENST00000599699 ASAH2Q9NR71 780 aa30.18■■■□□ 2.42
SSBP4-206ENST00000599699 GTF3C4Q9UKN8 822 aa30.18■■■□□ 2.42
SSBP4-206ENST00000599699 ZFP37Q9Y6Q3 630 aaPredicted RBP30.18■■■□□ 2.42
SSBP4-206ENST00000599699 ZNF197O14709 1029 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 MYL4P12829 197 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 BMP6P22004 513 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 LMO2P25791 158 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 SLC5A9Q2M3M2 681 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 SGSM1Q2NKQ1 1148 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 TMEM31Q5JXX7 168 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 HS6ST3Q8IZP7 471 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 OR6B3Q8NGW1 331 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 ELMO3Q96BJ8 720 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 SYT15Q9BQS2 421 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 KCNK12Q9HB15 430 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 AVENQ9NQS1 362 aaPredicted RBP30.17■■■□□ 2.42
SSBP4-206ENST00000599699 KIAA1468Q9P260 1216 aa30.17■■■□□ 2.42
SSBP4-206ENST00000599699 SLC16A3O15427 465 aaKnown RBP30.16■■■□□ 2.42
SSBP4-206ENST00000599699 GNL1P36915 607 aaPredicted RBP30.16■■■□□ 2.42
SSBP4-206ENST00000599699 ENPEPQ07075 957 aa30.16■■■□□ 2.42
SSBP4-206ENST00000599699 PPP3CAQ08209 521 aa30.16■■■□□ 2.42
SSBP4-206ENST00000599699 VEPH1Q14D04 833 aa30.16■■■□□ 2.42
SSBP4-206ENST00000599699 NELFBQ8WX92 580 aa30.16■■■□□ 2.42
SSBP4-206ENST00000599699 PI4K2AQ9BTU6 479 aa30.16■■■□□ 2.42
SSBP4-206ENST00000599699 VRTNQ9H8Y1 702 aa30.16■■■□□ 2.42
SSBP4-206ENST00000599699 IGSF9Q9P2J2 1179 aa30.16■■■□□ 2.42
SSBP4-206ENST00000599699 CDH9Q9ULB4 789 aa30.16■■■□□ 2.42
SSBP4-206ENST00000599699 CTNND2Q9UQB3 1225 aa30.16■■■□□ 2.42
SSBP4-206ENST00000599699 DOCK6Q96HP0 2047 aa30.16■■■□□ 2.42
SSBP4-206ENST00000599699 PPP1R3GB7ZBB8 358 aa30.15■■■□□ 2.42
SSBP4-206ENST00000599699 TACC1O75410 805 aa30.15■■■□□ 2.42
SSBP4-206ENST00000599699 HLA-DRAP01903 254 aa30.15■■■□□ 2.42
SSBP4-206ENST00000599699 HAPLN1P10915 354 aaPredicted RBP30.15■■■□□ 2.42
SSBP4-206ENST00000599699 P4HA1P13674 534 aa30.15■■■□□ 2.42
SSBP4-206ENST00000599699 PSMC1P62191 440 aaKnown RBP30.15■■■□□ 2.42
SSBP4-206ENST00000599699 SCARA5Q6ZMJ2 495 aa30.15■■■□□ 2.42
SSBP4-206ENST00000599699 ITIH5Q86UX2 942 aa30.15■■■□□ 2.42
SSBP4-206ENST00000599699 SPATA2LQ8IUW3 424 aaPredicted RBP30.15■■■□□ 2.42
SSBP4-206ENST00000599699 LEMD2Q8NC56 503 aa30.15■■■□□ 2.42
SSBP4-206ENST00000599699 TCEAL4Q96EI5 215 aa30.15■■■□□ 2.42
SSBP4-206ENST00000599699 DNAJC25Q9H1X3 360 aa30.15■■■□□ 2.42
SSBP4-206ENST00000599699 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.15■■■□□ 2.42
SSBP4-206ENST00000599699 ASB3Q9Y575 518 aa30.15■■■□□ 2.42
SSBP4-206ENST00000599699 MYBPHLA2RUH7 354 aa30.14■■■□□ 2.42
SSBP4-206ENST00000599699 STX10O60499 249 aa30.14■■■□□ 2.42
SSBP4-206ENST00000599699 ATP2C2O75185 946 aa30.14■■■□□ 2.42
SSBP4-206ENST00000599699 FAM163BP0C2L3 166 aa30.14■■■□□ 2.42
SSBP4-206ENST00000599699 CEBPBP17676 345 aa30.14■■■□□ 2.42
SSBP4-206ENST00000599699 TAF12Q16514 161 aa30.14■■■□□ 2.42
SSBP4-206ENST00000599699 TCERG1LQ5VWI1 586 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms