RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SIX1Q15475 284 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 CLUL1Q15846 466 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 GLRA4Q5JXX5 417 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 CYP4A22Q5TCH4 519 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 MAATS1Q7Z4T9 603 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 C7orf31Q8N865 590 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 DDX27Q96GQ7 796 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 TRIM51Q9BSJ1 452 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 RNF208Q9H0X6 261 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 PLEKHA5Q9HAU0 1116 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 CYP3A43Q9HB55 503 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 TJP2Q9UDY2 1190 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 TUBGCP4Q9UGJ1 667 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 PIN4Q9Y237 131 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 BRCA2P51587 3418 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 AKAP5P24588 427 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 PTPN11Q06124 597 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 PCBP1Q15365 356 aaKnown RBP eCLIP18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 ZBTB6Q15916 424 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 SMYD5Q6GMV2 418 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 C18orf25Q96B23 403 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 C18orf8Q96DM3 657 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 TMEM176AQ96HP8 235 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 APOL6Q9BWW8 343 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 NEUROG2Q9H2A3 272 aa18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 DDX20Q9UHI6 824 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-216ENST00000598201 TMEM191CA6NGB0 347 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 AGPSO00116 658 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 PHF2O75151 1096 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 RECQL4O94761 1208 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 STAU1O95793 577 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 PGK1P00558 417 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 RARAP10276 462 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 AARSP49588 968 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 ZNF252P-AS1Q0IIN9 211 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 PTPN20Q4JDL3 420 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 GNASQ5JWF2 1037 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 TTC27Q6P3X3 843 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 ALKAL1Q6UXT8 129 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 APBB1IPQ7Z5R6 666 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 ERICH1Q86X53 443 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 HERPUD2Q9BSE4 406 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 LHX5Q9H2C1 402 aa18.06■□□□□ 0.48
SHKBP1-216ENST00000598201 DAPK3O43293 454 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 RARBP10826 455 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 P4HA1P13674 534 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 DR1Q01658 176 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 OGDHQ02218 1023 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 PPP1R15BQ5SWA1 713 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 UBXN11Q5T124 520 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 DNAJC24Q6P3W2 148 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 SEC14L1Q92503 715 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 MCEEQ96PE7 176 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 TRIM6Q9C030 488 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 RNF39Q9H2S5 420 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 PAK6Q9NQU5 681 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 USTQ9Y2C2 406 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 DERAQ9Y315 318 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 CEP83Q9Y592 693 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 DNAH12Q6ZR08 3092 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 MED7O43513 233 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 SYF2O95926 243 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 TCF4P15884 667 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 NDST1P52848 882 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 CRYBB1P53674 252 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 YARSP54577 528 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 GJA9P57773 515 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 INCA1Q0VD86 236 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 GPS2Q13227 327 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 NNTQ13423 1086 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 CUL1Q13616 776 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 HLTFQ14527 1009 aaKnown RBP eCLIP18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 PPP2R5EQ16537 467 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 CXCL17Q6UXB2 119 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 RIN2Q8WYP3 895 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 MAGOHBQ96A72 148 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 ACBD3Q9H3P7 528 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 CNTN3Q9P232 1028 aa18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 BARX2Q9UMQ3 279 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-216ENST00000598201 SCN1AP35498 2009 aa18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 MICAL2O94851 1124 aa18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 AXLP30530 894 aa18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 GGCXP38435 758 aa18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 PTGIRP43119 386 aa18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 LHX8Q68G74 356 aa18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 HEXIM2Q96MH2 286 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 CPXM1Q96SM3 734 aa18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 DPH5Q9H2P9 285 aa18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 KLK14Q9P0G3 267 aa18.04■□□□□ 0.48
SHKBP1-216ENST00000598201 FSCN2O14926 492 aa18.03■□□□□ 0.48
SHKBP1-216ENST00000598201 GNAT1P11488 350 aa18.03■□□□□ 0.48
SHKBP1-216ENST00000598201 CYP3A5P20815 502 aa18.03■□□□□ 0.48
SHKBP1-216ENST00000598201 GYS2P54840 703 aa18.03■□□□□ 0.48
SHKBP1-216ENST00000598201 FAM193AP78312 1265 aa18.03■□□□□ 0.48
SHKBP1-216ENST00000598201 CYP1B1Q16678 543 aa18.03■□□□□ 0.48
SHKBP1-216ENST00000598201 JAMLQ86YT9 394 aa18.03■□□□□ 0.48
SHKBP1-216ENST00000598201 EIF1ADQ8N9N8 165 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-216ENST00000598201 C3orf20Q8ND61 904 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms