RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ACAT1P24752 427 aaKnown RBP15.34■□□□□ 0.05
VRK3-213ENST00000597215 YWHAEP62258 255 aaKnown RBP15.34■□□□□ 0.05
VRK3-213ENST00000597215 SMARCB1Q12824 385 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 ADAM15Q13444 863 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 CUL2Q13617 745 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 KCNC3Q14003 757 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 COL19A1Q14993 1142 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 FILIP1LQ4L180 1135 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 INTS6LQ5JSJ4 861 aaKnown RBP15.34■□□□□ 0.05
VRK3-213ENST00000597215 LILRA6Q6PI73 481 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 TRIM65Q6PJ69 517 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 PPM1KQ8N3J5 372 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 ZNF461Q8TAF7 563 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 FAM81BQ96LP2 452 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 TMEM209Q96SK2 561 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 SYT15Q9BQS2 421 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 DNAI2Q9GZS0 605 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 PLEKHA4Q9H4M7 779 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 DZANK1Q9NVP4 752 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 CLDND1Q9NY35 253 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 FBXW11Q9UKB1 542 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 MTCL1Q9Y4B5 1905 aaKnown RBP15.34■□□□□ 0.05
VRK3-213ENST00000597215 LINC01565O15544 149 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 ABLIM3O94929 683 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 GLP2RO95838 553 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 PDGFRBP09619 1106 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 CD58P19256 250 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 TRIM21P19474 475 aaKnown RBP15.33■□□□□ 0.04
VRK3-213ENST00000597215 SLC9A1P19634 815 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 LMO2P25791 158 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 PON1P27169 355 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 GCNT1Q02742 428 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 INCA1Q0VD86 236 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 GPR17Q13304 367 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 CTC1Q2NKJ3 1217 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 SLC39A12Q504Y0 691 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 TMEM184AQ6ZMB5 413 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 EP400NLQ6ZTU2 488 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 APTXQ7Z2E3 356 aaKnown RBP15.33■□□□□ 0.04
VRK3-213ENST00000597215 UNC93AQ86WB7 457 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 KREMEN2Q8NCW0 462 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 VN1R2Q8NFZ6 395 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 HDAC7Q8WUI4 952 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 TNIP3Q96KP6 325 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 ARID3AQ99856 593 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 MAN1C1Q9NR34 630 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 APEX2Q9UBZ4 518 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 AFF4Q9UHB7 1163 aaKnown RBP15.33■□□□□ 0.04
VRK3-213ENST00000597215 MAFFQ9ULX9 164 aa15.33■□□□□ 0.04
VRK3-213ENST00000597215 BARX2Q9UMQ3 279 aaPredicted RBP15.33■□□□□ 0.04
VRK3-213ENST00000597215 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 HCRTO43612 131 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 CILPO75339 1184 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 SERPINC1P01008 464 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 ATF2P15336 505 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 ELF1P32519 619 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 NDST1P52848 882 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 RBM10P98175 930 aaKnown RBP15.32■□□□□ 0.04
VRK3-213ENST00000597215 UBXN1Q04323 297 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 MAPRE1Q15691 268 aaKnown RBP15.32■□□□□ 0.04
VRK3-213ENST00000597215 NFE2Q16621 373 aaPredicted RBP15.32■□□□□ 0.04
VRK3-213ENST00000597215 LIN9Q5TKA1 542 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 RNF19BQ6ZMZ0 732 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 ENOSF1Q7L5Y1 443 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 ARHGEF19Q8IW93 802 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 RNF214Q8ND24 703 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 C2orf15Q8WU43 125 aaKnown RBP15.32■□□□□ 0.04
VRK3-213ENST00000597215 PGLYRP2Q96PD5 576 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 CISHQ9NSE2 258 aa15.32■□□□□ 0.04
VRK3-213ENST00000597215 MTMR11A4FU01 709 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 PRRG1O14668 218 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 TBX10O75333 385 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 SPATA31D3P0C874 917 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 PSMC1P62191 440 aaKnown RBP15.31■□□□□ 0.04
VRK3-213ENST00000597215 FANCCQ00597 558 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 ADCY1Q08828 1119 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 KCNMA1Q12791 1236 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 PHLDB3Q6NSJ2 640 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 FAM171BQ6P995 826 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 SPATA31D4Q6ZUB0 917 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 CCDC149Q6ZUS6 474 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 RTL10Q7L3V2 364 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 RRAGAQ7L523 313 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 LRRTM3Q86VH5 581 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 B3GALNT2Q8NCR0 500 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 SPPL2BQ8TCT7 592 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 HLA-CQ95604 372 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 PKMYT1Q99640 499 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 LSM14BQ9BX40 385 aaKnown RBP15.31■□□□□ 0.04
VRK3-213ENST00000597215 NT5C1AQ9BXI3 368 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 DPEP3Q9H4B8 488 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 UBE2ZQ9H832 354 aaPredicted RBP15.31■□□□□ 0.04
VRK3-213ENST00000597215 SFXN1Q9H9B4 322 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 UBE2TQ9NPD8 197 aaPredicted RBP15.31■□□□□ 0.04
VRK3-213ENST00000597215 RTN4Q9NQC3 1192 aaKnown RBP15.31■□□□□ 0.04
VRK3-213ENST00000597215 HMGXB4Q9UGU5 601 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 COG5Q9UP83 839 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 NME7Q9Y5B8 376 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 PCDHB5Q9Y5E4 795 aa15.31■□□□□ 0.04
VRK3-213ENST00000597215 A0A1B0GTH6 734 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms