RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 INPP5FQ9Y2H2 1132 aa24.41■■□□□ 1.5
SPTBN4-210ENST00000596900 A8MXQ7 604 aa24.4■■□□□ 1.5
SPTBN4-210ENST00000596900 POMCP01189 267 aa24.4■■□□□ 1.5
SPTBN4-210ENST00000596900 CLCNKBP51801 687 aa24.4■■□□□ 1.5
SPTBN4-210ENST00000596900 AFF1P51825 1210 aaKnown RBP24.4■■□□□ 1.5
SPTBN4-210ENST00000596900 FAM189BP81408 668 aa24.4■■□□□ 1.5
SPTBN4-210ENST00000596900 CKAP4Q07065 602 aaKnown RBP24.4■■□□□ 1.5
SPTBN4-210ENST00000596900 TUSC3Q13454 348 aa24.4■■□□□ 1.5
SPTBN4-210ENST00000596900 RPS6KA1Q15418 735 aa24.4■■□□□ 1.5
SPTBN4-210ENST00000596900 RTN4RL1Q86UN2 441 aaPredicted RBP24.4■■□□□ 1.5
SPTBN4-210ENST00000596900 OSBPL9Q96SU4 736 aa24.4■■□□□ 1.5
SPTBN4-210ENST00000596900 O00370 1275 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 RRM1P23921 792 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 CTCFP49711 727 aaPredicted RBP24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 LBX1P52954 281 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 MMS22LQ6ZRQ5 1243 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 LIMS2Q7Z4I7 341 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 ERICH1Q86X53 443 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 ADGRF2Q8IZF7 708 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 DBF4BQ8NFT6 615 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 URGCPQ8TCY9 931 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 LINC01599Q8WXQ3 324 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 STRIP2Q9ULQ0 834 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 L1RE1Q9UN81 338 aa24.39■■□□□ 1.5
SPTBN4-210ENST00000596900 CTIFO43310 598 aaKnown RBP24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 NCK2O43639 380 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 GNL1P36915 607 aaPredicted RBP24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 TRIM60Q495X7 471 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 TNIP3Q96KP6 325 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 ELAC1Q9H777 363 aaKnown RBP24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 TMEM161AQ9NX61 479 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 CASTOR2A6NHX0 329 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 M0QYV0 167 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 CYB561D2O14569 222 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 MICAL2O94851 1124 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 CAPN2P17655 700 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 WARSP23381 471 aaKnown RBP24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 TLE2Q04725 743 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 FAAP100Q0VG06 881 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 UPP1Q16831 310 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 LCLAT1Q6UWP7 414 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 NT5DC3Q86UY8 548 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 KBTBD7Q8WVZ9 684 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 ABCB6Q9NP58 842 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 PARVAQ9NVD7 372 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 KANSL3Q9P2N6 904 aa24.38■■□□□ 1.49
SPTBN4-210ENST00000596900 KIF4AO95239 1232 aa24.37■■□□□ 1.49
SPTBN4-210ENST00000596900 DENND1BQ6P3S1 775 aa24.37■■□□□ 1.49
SPTBN4-210ENST00000596900 ACOT1Q86TX2 421 aa24.37■■□□□ 1.49
SPTBN4-210ENST00000596900 TMEM86AQ8N2M4 240 aa24.37■■□□□ 1.49
SPTBN4-210ENST00000596900 GOLPH3Q9H4A6 298 aa24.37■■□□□ 1.49
SPTBN4-210ENST00000596900 RNF216Q9NWF9 866 aaPredicted RBP24.37■■□□□ 1.49
SPTBN4-210ENST00000596900 TSPAN16Q9UKR8 245 aa24.37■■□□□ 1.49
SPTBN4-210ENST00000596900 STXBP5LQ9Y2K9 1186 aa24.37■■□□□ 1.49
SPTBN4-210ENST00000596900 EFCAB8A8MWE9 144 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 SRGAP2O75044 1071 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 PTP4A2Q12974 167 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 DSTYKQ6XUX3 929 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 PDCL2Q8N4E4 241 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 RPGRIP1Q96KN7 1286 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 SENP8Q96LD8 212 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 RNF14Q9UBS8 474 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 HESX1Q9UBX0 185 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 ANAPC7Q9UJX3 599 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 PACSIN2Q9UNF0 486 aaPredicted RBP24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 CTAGE15A4D2H0 777 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 CES2O00748 559 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 CTAGE8P0CG41 777 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 TUBB4BP68371 445 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 GPNMBQ14956 572 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 CCDC181Q5TID7 509 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 PLEKHA7Q6IQ23 1121 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 CTAGE6Q86UF2 777 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 CTAGE4Q8IX94 777 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 CRYBG2Q8N1P7 616 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 WDTC1Q8N5D0 677 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 MIS12Q9H081 205 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 CHORDC1Q9UHD1 332 aaPredicted RBP24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 LCMT1Q9UIC8 334 aa24.36■■□□□ 1.49
SPTBN4-210ENST00000596900 ARHGEF37A1IGU5 675 aa24.35■■□□□ 1.49
SPTBN4-210ENST00000596900 MESDQ14696 234 aa24.35■■□□□ 1.49
SPTBN4-210ENST00000596900 NOMO2Q5JPE7 1267 aa24.35■■□□□ 1.49
SPTBN4-210ENST00000596900 ABI1Q8IZP0 508 aa24.35■■□□□ 1.49
SPTBN4-210ENST00000596900 CAPZA3Q96KX2 299 aa24.35■■□□□ 1.49
SPTBN4-210ENST00000596900 PSMB7Q99436 277 aa24.35■■□□□ 1.49
SPTBN4-210ENST00000596900 PPP1R12CQ9BZL4 782 aa24.35■■□□□ 1.49
SPTBN4-210ENST00000596900 SYNCQ9H7C4 482 aa24.35■■□□□ 1.49
SPTBN4-210ENST00000596900 PCDHB7Q9Y5E2 793 aa24.35■■□□□ 1.49
SPTBN4-210ENST00000596900 ALG6Q9Y672 507 aa24.35■■□□□ 1.49
SPTBN4-210ENST00000596900 MIF4GDA9UHW6 222 aaKnown RBP24.34■■□□□ 1.49
SPTBN4-210ENST00000596900 B3GAT3O94766 335 aa24.34■■□□□ 1.49
SPTBN4-210ENST00000596900 PAFAH1B1P43034 410 aa24.34■■□□□ 1.49
SPTBN4-210ENST00000596900 LHX1P48742 406 aa24.34■■□□□ 1.49
SPTBN4-210ENST00000596900 AARSP49588 968 aaKnown RBP eCLIP24.34■■□□□ 1.49
SPTBN4-210ENST00000596900 TAP1Q03518 808 aa24.34■■□□□ 1.49
SPTBN4-210ENST00000596900 C2CD6Q53TS8 623 aa24.34■■□□□ 1.49
SPTBN4-210ENST00000596900 ARHGAP17Q68EM7 881 aa24.34■■□□□ 1.49
SPTBN4-210ENST00000596900 C12orf29Q8N999 325 aa24.34■■□□□ 1.49
SPTBN4-210ENST00000596900 IPO4Q8TEX9 1081 aaKnown RBP24.34■■□□□ 1.49
SPTBN4-210ENST00000596900 DIS3LQ8TF46 1054 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms