RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 SIM2Q14190 667 aaPredicted RBP17.2■□□□□ 0.34
LINC02560-201ENST00000596379 PON2Q15165 354 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 TAF12Q16514 161 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 DGKKQ5KSL6 1271 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 LAIR1Q6GTX8 287 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 CRELD2Q6UXH1 353 aaPredicted RBP17.2■□□□□ 0.34
LINC02560-201ENST00000596379 Q6ZS52 159 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 USP49Q70CQ1 688 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 DYMQ7RTS9 669 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 BPIFB1Q8TDL5 484 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 POMGNT1Q8WZA1 660 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 SLC46A2Q9BY10 475 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 SMG9Q9H0W8 520 aaKnown RBP17.2■□□□□ 0.34
LINC02560-201ENST00000596379 NCOR2Q9Y618 2525 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 RALGAPA1Q6GYQ0 2036 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 K7ESF4 209 aa17.19■□□□□ 0.34
LINC02560-201ENST00000596379 TULP1O00294 542 aaPredicted RBP17.19■□□□□ 0.34
LINC02560-201ENST00000596379 HAPLN1P10915 354 aaPredicted RBP17.19■□□□□ 0.34
LINC02560-201ENST00000596379 ADSSP30520 456 aa17.19■□□□□ 0.34
LINC02560-201ENST00000596379 POU5F1Q01860 360 aaKnown RBP17.19■□□□□ 0.34
LINC02560-201ENST00000596379 HEATR6Q6AI08 1181 aaKnown RBP17.19■□□□□ 0.34
LINC02560-201ENST00000596379 SFR1Q86XK3 245 aa17.19■□□□□ 0.34
LINC02560-201ENST00000596379 EFCAB13Q8IY85 973 aa17.19■□□□□ 0.34
LINC02560-201ENST00000596379 SPPL2BQ8TCT7 592 aa17.19■□□□□ 0.34
LINC02560-201ENST00000596379 C2orf15Q8WU43 125 aaKnown RBP17.19■□□□□ 0.34
LINC02560-201ENST00000596379 GCNAQ96QF7 691 aa17.19■□□□□ 0.34
LINC02560-201ENST00000596379 C2orf42Q9NWW7 574 aa17.19■□□□□ 0.34
LINC02560-201ENST00000596379 ABI2Q9NYB9 513 aaPredicted RBP17.19■□□□□ 0.34
LINC02560-201ENST00000596379 CDV3Q9UKY7 258 aaKnown RBP17.19■□□□□ 0.34
LINC02560-201ENST00000596379 DENND4CQ5VZ89 1909 aa17.19■□□□□ 0.34
LINC02560-201ENST00000596379 ZNF638Q14966 1978 aaKnown RBP17.19■□□□□ 0.34
LINC02560-201ENST00000596379 SPTBN2O15020 2390 aa17.18■□□□□ 0.34
LINC02560-201ENST00000596379 DCDC2BA2VCK2 349 aa17.18■□□□□ 0.34
LINC02560-201ENST00000596379 KPNA7A9QM74 516 aa17.18■□□□□ 0.34
LINC02560-201ENST00000596379 PAPSS2O95340 614 aaPredicted RBP17.18■□□□□ 0.34
LINC02560-201ENST00000596379 RETP07949 1114 aa17.18■□□□□ 0.34
LINC02560-201ENST00000596379 PLCB2Q00722 1185 aa17.18■□□□□ 0.34
LINC02560-201ENST00000596379 SMARCB1Q12824 385 aa17.18■□□□□ 0.34
LINC02560-201ENST00000596379 SRSF5Q13243 272 aaKnown RBP17.18■□□□□ 0.34
LINC02560-201ENST00000596379 POSTNQ15063 836 aa17.18■□□□□ 0.34
LINC02560-201ENST00000596379 LONP2Q86WA8 852 aa17.18■□□□□ 0.34
LINC02560-201ENST00000596379 DCP1BQ8IZD4 617 aaKnown RBP17.18■□□□□ 0.34
LINC02560-201ENST00000596379 THG1LQ9NWX6 298 aaKnown RBP17.18■□□□□ 0.34
LINC02560-201ENST00000596379 CLIC4Q9Y696 253 aa17.18■□□□□ 0.34
LINC02560-201ENST00000596379 ATG2BQ96BY7 2078 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 PPP1R37O75864 691 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 IL18RAPO95256 599 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 HOXC13P31276 330 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 CNR2P34972 360 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 KCNA1Q09470 495 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 CCINQ13939 588 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 ITPRIPL2Q3MIP1 535 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 SV2CQ496J9 727 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 NT5DC4Q86YG4 428 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 CMTM8Q8IZV2 173 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 SYNPOQ8N3V7 929 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 HVCN1Q96D96 273 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 RTKNQ9BST9 563 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 STRA6Q9BX79 667 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 MRPL44Q9H9J2 332 aaKnown RBP17.17■□□□□ 0.34
LINC02560-201ENST00000596379 GKN1Q9NS71 199 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 TMLHEQ9NVH6 421 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 TBC1D7Q9P0N9 293 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 CCDC39Q9UFE4 941 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 PCDHB5Q9Y5E4 795 aa17.17■□□□□ 0.34
LINC02560-201ENST00000596379 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.17■□□□□ 0.34
LINC02560-201ENST00000596379 VPS37CA5D8V6 355 aaPredicted RBP17.16■□□□□ 0.34
LINC02560-201ENST00000596379 MYMKA6NI61 221 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 F11P03951 625 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 HMGA1P17096 107 aaKnown RBP17.16■□□□□ 0.34
LINC02560-201ENST00000596379 WNT7BP56706 349 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 NLRP12P59046 1061 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 PTPAQ15257 358 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 RRAGBQ5VZM2 374 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 TMEM150AQ86TG1 271 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 MAB21L3Q8N8X9 362 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 ZSWIM2Q8NEG5 633 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 ZNF560Q96MR9 790 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 FAM213AQ9BRX8 229 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 PI4K2AQ9BTU6 479 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
LINC02560-201ENST00000596379 STK17AQ9UEE5 414 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 ZMYM5Q9UJ78 669 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 AGAP1Q9UPQ3 857 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 CCL26Q9Y258 94 aa17.16■□□□□ 0.34
LINC02560-201ENST00000596379 SDK1Q7Z5N4 2213 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 PRPF40AO75400 957 aaKnown RBP17.15■□□□□ 0.34
LINC02560-201ENST00000596379 POLR2BP30876 1174 aaKnown RBP17.15■□□□□ 0.34
LINC02560-201ENST00000596379 AVPR1AP37288 418 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 GPR15P49685 360 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 TFAMQ00059 246 aaKnown RBP17.15■□□□□ 0.34
LINC02560-201ENST00000596379 TSPY1Q01534 308 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 SDHAF4Q5VUM1 108 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 SV2BQ7L1I2 683 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.15■□□□□ 0.34
LINC02560-201ENST00000596379 STKLD1Q8NE28 680 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
LINC02560-201ENST00000596379 DNAJC19Q96DA6 116 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 SAAL1Q96ER3 474 aa17.15■□□□□ 0.34
LINC02560-201ENST00000596379 CLIC6Q96NY7 704 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms