RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PVALEFA0A1B0GWK0 134 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 FAM170BA6NMN3 283 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 TGFB1I1O43294 461 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 LRRN2O75325 713 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 TNNC2P02585 160 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 GLULP15104 373 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 CD72P21854 359 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 SNRPFP62306 86 aaKnown RBP25.25■■□□□ 1.63
LSM4-204ENST00000594828 CUL4BQ13620 913 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 DUOXA2Q1HG44 320 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 TPRG1Q6ZUI0 275 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 GAREM2Q75VX8 874 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 NELFCDQ8IXH7 590 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 TMEM86AQ8N2M4 240 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 RDH13Q8NBN7 331 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 DEPDC1BQ8WUY9 529 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 IRF7Q92985 503 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 E2F7Q96AV8 911 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 OSBPL6Q9BZF3 934 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 HEBP1Q9NRV9 189 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 AGPAT3Q9NRZ7 376 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 MTF2Q9Y483 593 aaPredicted RBP25.25■■□□□ 1.63
LSM4-204ENST00000594828 PCDHB5Q9Y5E4 795 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 SNX9Q9Y5X1 595 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 UBE4BO95155 1302 aa25.25■■□□□ 1.63
LSM4-204ENST00000594828 HAPLN1P10915 354 aaPredicted RBP25.24■■□□□ 1.63
LSM4-204ENST00000594828 ATF6P18850 670 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 GABRR2P28476 465 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 GDI1P31150 447 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 MYO1EQ12965 1108 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 TAF12Q16514 161 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 FRMD5Q7Z6J6 570 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 MFSD6LQ8IWD5 586 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 OR5B17Q8NGF7 314 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 NELL2Q99435 816 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 ACBD6Q9BR61 282 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 BCO2Q9BYV7 579 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 SLC39A2Q9NP94 309 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 LTB4R2Q9NPC1 389 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 DDX43Q9NXZ2 648 aaKnown RBP25.24■■□□□ 1.63
LSM4-204ENST00000594828 SERTAD1Q9UHV2 236 aa25.24■■□□□ 1.63
LSM4-204ENST00000594828 PTPRJQ12913 1337 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 HEPACAM2A8MVW5 462 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 CLIC2O15247 247 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 SLFN14P0C7P3 912 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 MYL7Q01449 175 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 SNRNP35Q16560 246 aaKnown RBP25.23■■□□□ 1.63
LSM4-204ENST00000594828 NFE2Q16621 373 aaPredicted RBP25.23■■□□□ 1.63
LSM4-204ENST00000594828 ARHGAP15Q53QZ3 475 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 STXBP5Q5T5C0 1151 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 ZNF852Q6ZMS4 543 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 HS2ST1Q7LGA3 356 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 C1orf210Q8IVY1 113 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 TOP6BLQ8N6T0 577 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 GIPC2Q8TF65 315 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 TMLHEQ9NVH6 421 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 COL4A3Q01955 1670 aa25.23■■□□□ 1.63
LSM4-204ENST00000594828 CACNA1HO95180 2353 aa25.22■■□□□ 1.63
LSM4-204ENST00000594828 ZNF263O14978 683 aa25.22■■□□□ 1.63
LSM4-204ENST00000594828 CYP2J2P51589 502 aa25.22■■□□□ 1.63
LSM4-204ENST00000594828 WDR49Q8IV35 697 aa25.22■■□□□ 1.63
LSM4-204ENST00000594828 ARID3BQ8IVW6 561 aaPredicted RBP25.22■■□□□ 1.63
LSM4-204ENST00000594828 GRAMD1CQ8IYS0 662 aa25.22■■□□□ 1.63
LSM4-204ENST00000594828 SPATA18Q8TC71 538 aa25.22■■□□□ 1.63
LSM4-204ENST00000594828 HPDLQ96IR7 371 aa25.22■■□□□ 1.63
LSM4-204ENST00000594828 TRPV5Q9NQA5 729 aa25.22■■□□□ 1.63
LSM4-204ENST00000594828 MRPS17Q9Y2R5 130 aaKnown RBP25.22■■□□□ 1.63
LSM4-204ENST00000594828 ACAT1P24752 427 aaKnown RBP25.21■■□□□ 1.63
LSM4-204ENST00000594828 LHX1P48742 406 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 BMT2Q1RMZ1 405 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 INTS6LQ5JSJ4 861 aaKnown RBP25.21■■□□□ 1.63
LSM4-204ENST00000594828 GPR158Q5T848 1215 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 DPH6Q7L8W6 267 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 GPIHBP1Q8IV16 184 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 YAF2Q8IY57 180 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 ADGRF2Q8IZF7 708 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 XXYLT1Q8NBI6 393 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 NKD2Q969F2 451 aaPredicted RBP25.21■■□□□ 1.63
LSM4-204ENST00000594828 PAGE5Q96GU1 130 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 SPATA32Q96LK8 384 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 FNBP1Q96RU3 617 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 PI4K2AQ9BTU6 479 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 MKNK1Q9BUB5 465 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 CGNQ9P2M7 1197 aaKnown RBP25.21■■□□□ 1.63
LSM4-204ENST00000594828 ZDHHC9Q9Y397 364 aa25.21■■□□□ 1.63
LSM4-204ENST00000594828 GABRDO14764 452 aa25.2■■□□□ 1.62
LSM4-204ENST00000594828 NCAM2O15394 837 aa25.2■■□□□ 1.62
LSM4-204ENST00000594828 ACTN4O43707 911 aaKnown RBP25.2■■□□□ 1.62
LSM4-204ENST00000594828 PRPF40AO75400 957 aaKnown RBP25.2■■□□□ 1.62
LSM4-204ENST00000594828 DLATP10515 647 aaKnown RBP25.2■■□□□ 1.62
LSM4-204ENST00000594828 TNNI1P19237 187 aa25.2■■□□□ 1.62
LSM4-204ENST00000594828 CMA1P23946 247 aa25.2■■□□□ 1.62
LSM4-204ENST00000594828 CDC25CP30307 473 aa25.2■■□□□ 1.62
LSM4-204ENST00000594828 KRT85P78386 507 aa25.2■■□□□ 1.62
LSM4-204ENST00000594828 KNOP1Q1ED39 458 aaKnown RBP25.2■■□□□ 1.62
LSM4-204ENST00000594828 SOWAHAQ2M3V2 549 aa25.2■■□□□ 1.62
LSM4-204ENST00000594828 ASCL5Q7RTU5 278 aa25.2■■□□□ 1.62
LSM4-204ENST00000594828 TRAPPC11Q7Z392 1133 aa25.2■■□□□ 1.62
LSM4-204ENST00000594828 OSTM1Q86WC4 334 aa25.2■■□□□ 1.62
LSM4-204ENST00000594828 LEO1Q8WVC0 666 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms