RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 GOLGA6L22H0YM25 854 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 N4BP1O75113 896 aaKnown RBP23.48■■□□□ 1.35
HOMER3-206ENST00000594439 TACC1O75410 805 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 HLA-DRAP01903 254 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 FAM163BP0C2L3 166 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 TNNC1P63316 161 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 TSPY1Q01534 308 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 TWF1Q12792 350 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 SMARCB1Q12824 385 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 PAK1Q13153 545 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 INTS6LQ5JSJ4 861 aaKnown RBP23.48■■□□□ 1.35
HOMER3-206ENST00000594439 OTOP3Q7RTS5 596 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 ELMO3Q96BJ8 720 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 CEP63Q96MT8 703 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 PKMYT1Q99640 499 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 MRPL45Q9BRJ2 306 aaKnown RBP23.48■■□□□ 1.35
HOMER3-206ENST00000594439 HSFX1Q9UBD0 423 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 NXF1Q9UBU9 619 aaKnown RBP23.48■■□□□ 1.35
HOMER3-206ENST00000594439 SLC27A5Q9Y2P5 690 aa23.48■■□□□ 1.35
HOMER3-206ENST00000594439 BICDL2A1A5D9 508 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 PCSK1P29120 753 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 GTF2H1P32780 548 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 CDR1P51861 262 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 STX17P56962 302 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 SGSM1Q2NKQ1 1148 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 ZNF667Q5HYK9 610 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 FILIP1Q7Z7B0 1213 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 ZDHHC14Q8IZN3 488 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 C2orf15Q8WU43 125 aaKnown RBP23.47■■□□□ 1.35
HOMER3-206ENST00000594439 TAF4BQ92750 862 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 MMRN2Q9H8L6 949 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 TMEM8AQ9HCN3 771 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 CEP72Q9P209 647 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 NME7Q9Y5B8 376 aa23.47■■□□□ 1.35
HOMER3-206ENST00000594439 ASS1P00966 412 aaKnown RBP23.46■■□□□ 1.35
HOMER3-206ENST00000594439 FSHRP23945 695 aa23.46■■□□□ 1.35
HOMER3-206ENST00000594439 LMO2P25791 158 aa23.46■■□□□ 1.35
HOMER3-206ENST00000594439 PIK3CAP42336 1068 aa23.46■■□□□ 1.35
HOMER3-206ENST00000594439 SPPL2BQ8TCT7 592 aa23.46■■□□□ 1.35
HOMER3-206ENST00000594439 TAS1R2Q8TE23 839 aa23.46■■□□□ 1.35
HOMER3-206ENST00000594439 ACSF2Q96CM8 615 aaPredicted RBP23.46■■□□□ 1.35
HOMER3-206ENST00000594439 MYADMQ96S97 322 aa23.46■■□□□ 1.35
HOMER3-206ENST00000594439 MYO10Q9HD67 2058 aa23.45■■□□□ 1.35
HOMER3-206ENST00000594439 SOAT2O75908 522 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 PTPN2P17706 415 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 PLD1Q13393 1074 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 NFE2Q16621 373 aaPredicted RBP23.45■■□□□ 1.34
HOMER3-206ENST00000594439 CCDC142Q17RM4 750 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 PABPC1LQ4VXU2 614 aaKnown RBP23.45■■□□□ 1.34
HOMER3-206ENST00000594439 KRT39Q6A163 491 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 GET4Q7L5D6 327 aaPredicted RBP23.45■■□□□ 1.34
HOMER3-206ENST00000594439 PLCD3Q8N3E9 789 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 ITFG1Q8TB96 612 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 SYT15Q9BQS2 421 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 DNAJC25Q9H1X3 360 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 SMYD3Q9H7B4 428 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 AVENQ9NQS1 362 aaPredicted RBP23.45■■□□□ 1.34
HOMER3-206ENST00000594439 ARMCX3Q9UH62 379 aaPredicted RBP23.45■■□□□ 1.34
HOMER3-206ENST00000594439 GTF3C4Q9UKN8 822 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 CDH9Q9ULB4 789 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 PCDHB5Q9Y5E4 795 aa23.45■■□□□ 1.34
HOMER3-206ENST00000594439 MYBPHLA2RUH7 354 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 STX10O60499 249 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 ATP2C2O75185 946 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 RHOP08100 348 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 PDGFRBP09619 1106 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 HAPLN1P10915 354 aaPredicted RBP23.44■■□□□ 1.34
HOMER3-206ENST00000594439 GBP2P32456 591 aaPredicted RBP23.44■■□□□ 1.34
HOMER3-206ENST00000594439 GNL1P36915 607 aaPredicted RBP23.44■■□□□ 1.34
HOMER3-206ENST00000594439 TUFMP49411 452 aaKnown RBP23.44■■□□□ 1.34
HOMER3-206ENST00000594439 SPOPLQ6IQ16 392 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 FAM171BQ6P995 826 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 FRMD5Q7Z6J6 570 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 MLKLQ8NB16 471 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 ZNF512Q96ME7 567 aaPredicted RBP23.44■■□□□ 1.34
HOMER3-206ENST00000594439 MED15Q96RN5 788 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 CORO1BQ9BR76 489 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 PI4K2AQ9BTU6 479 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 SDCBP2Q9H190 292 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 SNX25Q9H3E2 840 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 METTL14Q9HCE5 456 aaKnown RBP23.44■■□□□ 1.34
HOMER3-206ENST00000594439 CRTAC1Q9NQ79 661 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 ABI2Q9NYB9 513 aaPredicted RBP23.44■■□□□ 1.34
HOMER3-206ENST00000594439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.44■■□□□ 1.34
HOMER3-206ENST00000594439 MUTYHQ9UIF7 546 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 RWDD2AQ9UIY3 292 aa23.44■■□□□ 1.34
HOMER3-206ENST00000594439 PI4K2BG5E9Z4 385 aa23.43■■□□□ 1.34
HOMER3-206ENST00000594439 ALDH1A3P47895 512 aa23.43■■□□□ 1.34
HOMER3-206ENST00000594439 MXI1P50539 228 aa23.43■■□□□ 1.34
HOMER3-206ENST00000594439 CDH8P55286 799 aa23.43■■□□□ 1.34
HOMER3-206ENST00000594439 PSMC1P62191 440 aaKnown RBP23.43■■□□□ 1.34
HOMER3-206ENST00000594439 SLC5A9Q2M3M2 681 aa23.43■■□□□ 1.34
HOMER3-206ENST00000594439 DCAF17Q5H9S7 520 aaPredicted RBP23.43■■□□□ 1.34
HOMER3-206ENST00000594439 TCERG1LQ5VWI1 586 aa23.43■■□□□ 1.34
HOMER3-206ENST00000594439 ELMOD1Q8N336 334 aa23.43■■□□□ 1.34
HOMER3-206ENST00000594439 OR6B3Q8NGW1 331 aa23.43■■□□□ 1.34
HOMER3-206ENST00000594439 SLC35C1Q96A29 364 aa23.43■■□□□ 1.34
HOMER3-206ENST00000594439 SEPT5Q99719 369 aaPredicted RBP23.43■■□□□ 1.34
HOMER3-206ENST00000594439 APOBEC3GQ9HC16 384 aaKnown RBP23.43■■□□□ 1.34
HOMER3-206ENST00000594439 EPS15L1Q9UBC2 864 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms