RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PDGFDQ9GZP0 370 aaPredicted RBP17.39■□□□□ 0.37
LIG1-206ENST00000594067 PORCNQ9H237 461 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 ARID2Q68CP9 1835 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 A0A0B4J269 797 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 GOLGA8SH3BPF8 625 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 GOLGA8MH3BSY2 632 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 LDHAP00338 332 aaKnown RBP17.39■□□□□ 0.37
LIG1-206ENST00000594067 DPEP1P16444 411 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 ABL2P42684 1182 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 PSMC4P43686 418 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 BLMHQ13867 455 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 PARP6Q2NL67 630 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 CDCA2Q69YH5 1023 aaPredicted RBP17.39■□□□□ 0.37
LIG1-206ENST00000594067 NAIF1Q69YI7 327 aaPredicted RBP17.39■□□□□ 0.37
LIG1-206ENST00000594067 CEP128Q6ZU80 1094 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 KCNV2Q8TDN2 545 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 TMEM121Q9BTD3 319 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 SLCO1B3Q9NPD5 702 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 ZNF302Q9NR11 478 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 TXLNGQ9NUQ3 528 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 FZD1Q9UP38 647 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 LRRD1A4D1F6 860 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 SPATA31C2B4DYI2 1134 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 PIGRP01833 764 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 GNAZP19086 355 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 ABCD1P33897 745 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 TNFSF9P41273 254 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 NAMPTP43490 491 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 YARSP54577 528 aaKnown RBP17.38■□□□□ 0.37
LIG1-206ENST00000594067 BACE1P56817 501 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 TMEM132BQ14DG7 1078 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 CIAPIN1Q6FI81 312 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 CAPRIN2Q6IMN6 1127 aaKnown RBP17.38■□□□□ 0.37
LIG1-206ENST00000594067 ANKMY2Q8IV38 441 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 MICAL1Q8TDZ2 1067 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 DENND1AQ8TEH3 1009 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 CDHR1Q96JP9 859 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 TTC25Q96NG3 672 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 LRMDAQ9H2I8 198 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 C10orf88Q9H8K7 445 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 CYP39A1Q9NYL5 469 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 ZNF214Q9UL59 606 aaPredicted RBP17.38■□□□□ 0.37
LIG1-206ENST00000594067 GRID1Q9ULK0 1009 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 CHKBQ9Y259 395 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 STARD13Q9Y3M8 1113 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 FER1L6Q2WGJ9 1857 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 WDR81Q562E7 1941 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 KIAA1217Q5T5P2 1943 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 hCG_1818297A0A087WSY0 165 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 TTLL13PA6NNM8 815 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 SGK1O00141 431 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 MAGEB2O15479 319 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 OATP04181 439 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 HMGCS2P54868 508 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 WDR72Q3MJ13 1102 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 GNPTABQ3T906 1256 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 NBPF12Q5TAG4 269 aaPredicted RBP17.38■□□□□ 0.37
LIG1-206ENST00000594067 ERP27Q96DN0 273 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 IMPG2Q9BZV3 1241 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 DHX33Q9H6R0 707 aaKnown RBP17.38■□□□□ 0.37
LIG1-206ENST00000594067 CORO1CQ9ULV4 474 aaPredicted RBP17.38■□□□□ 0.37
LIG1-206ENST00000594067 PHTF1Q9UMS5 762 aa17.38■□□□□ 0.37
LIG1-206ENST00000594067 LIN7AO14910 233 aaPredicted RBP17.37■□□□□ 0.37
LIG1-206ENST00000594067 RPA3P35244 121 aaPredicted RBP17.37■□□□□ 0.37
LIG1-206ENST00000594067 ARL2P36404 184 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 ZNF132P52740 706 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 VCPP55072 806 aaKnown RBP17.37■□□□□ 0.37
LIG1-206ENST00000594067 PDIA2Q13087 525 aaKnown RBP17.37■□□□□ 0.37
LIG1-206ENST00000594067 TNFAIP1Q13829 316 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 CYP4A22Q5TCH4 519 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 DRICH1Q6PGQ1 229 aaPredicted RBP17.37■□□□□ 0.37
LIG1-206ENST00000594067 ZBTB33Q86T24 672 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 NAF1Q96HR8 494 aaKnown RBP17.37■□□□□ 0.37
LIG1-206ENST00000594067 SMC6Q96SB8 1091 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 SAE1Q9UBE0 346 aaPredicted RBP17.37■□□□□ 0.37
LIG1-206ENST00000594067 ADGRA2Q96PE1 1338 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 A0A1W2PPM1 405 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 CALB1P05937 261 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 KCNA3P22001 575 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 TGFB2P61812 414 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 DYNLT1P63172 113 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 GAD2Q05329 585 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 MCL1Q07820 350 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 FSTL1Q12841 308 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 NR1H3Q13133 447 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 MOGSQ13724 837 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 SPARCL1Q14515 664 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 MORF4L2Q15014 288 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 OASLQ15646 514 aaKnown RBP17.37■□□□□ 0.37
LIG1-206ENST00000594067 RNASEH2BQ5TBB1 312 aaKnown RBP17.37■□□□□ 0.37
LIG1-206ENST00000594067 VSIG1Q86XK7 387 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 UBR7Q8N806 425 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 SLC7A3Q8WY07 619 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 TMEM237Q96Q45 408 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 KCNG1Q9UIX4 513 aa17.37■□□□□ 0.37
LIG1-206ENST00000594067 DRG1Q9Y295 367 aaKnown RBP17.37■□□□□ 0.37
LIG1-206ENST00000594067 TCRBV5S1A1TA0A578 114 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 ATP5HO75947 161 aa17.36■□□□□ 0.37
LIG1-206ENST00000594067 MYCNP04198 464 aaPredicted RBP17.36■□□□□ 0.37
LIG1-206ENST00000594067 CA4P22748 312 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms