RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 VNN1O95497 513 aa21.01■□□□□ 0.95
LSM4-203ENST00000593829 GNA14O95837 355 aa21.01■□□□□ 0.95
LSM4-203ENST00000593829 ERCC5P28715 1186 aaPredicted RBP21.01■□□□□ 0.95
LSM4-203ENST00000593829 ROR1Q01973 937 aa21.01■□□□□ 0.95
LSM4-203ENST00000593829 DPH6Q7L8W6 267 aa21.01■□□□□ 0.95
LSM4-203ENST00000593829 SMRP1Q8NCR6 262 aa21.01■□□□□ 0.95
LSM4-203ENST00000593829 ZNF461Q8TAF7 563 aa21.01■□□□□ 0.95
LSM4-203ENST00000593829 ZNF592Q92610 1267 aa21.01■□□□□ 0.95
LSM4-203ENST00000593829 XYLT2Q9H1B5 865 aa21.01■□□□□ 0.95
LSM4-203ENST00000593829 MMRN2Q9H8L6 949 aa21.01■□□□□ 0.95
LSM4-203ENST00000593829 WDR72Q3MJ13 1102 aa21■□□□□ 0.95
LSM4-203ENST00000593829 DCAF17Q5H9S7 520 aaPredicted RBP21■□□□□ 0.95
LSM4-203ENST00000593829 CT47A1Q5JQC4 288 aaPredicted RBP21■□□□□ 0.95
LSM4-203ENST00000593829 KRT39Q6A163 491 aa21■□□□□ 0.95
LSM4-203ENST00000593829 MED15Q96RN5 788 aa21■□□□□ 0.95
LSM4-203ENST00000593829 VRTNQ9H8Y1 702 aa21■□□□□ 0.95
LSM4-203ENST00000593829 SFXN1Q9H9B4 322 aa21■□□□□ 0.95
LSM4-203ENST00000593829 FBXW11Q9UKB1 542 aa21■□□□□ 0.95
LSM4-203ENST00000593829 SPTBN5Q9NRC6 3674 aaKnown RBP21■□□□□ 0.95
LSM4-203ENST00000593829 PLXNA3P51805 1871 aa21■□□□□ 0.95
LSM4-203ENST00000593829 WDR27A2RRH5 827 aa21■□□□□ 0.95
LSM4-203ENST00000593829 ABLIM3O94929 683 aa21■□□□□ 0.95
LSM4-203ENST00000593829 CPB1P15086 417 aa21■□□□□ 0.95
LSM4-203ENST00000593829 KCNQ1P51787 676 aa21■□□□□ 0.95
LSM4-203ENST00000593829 TNNC1P63316 161 aa21■□□□□ 0.95
LSM4-203ENST00000593829 SMAD4Q13485 552 aaKnown RBP21■□□□□ 0.95
LSM4-203ENST00000593829 SOWAHAQ2M3V2 549 aa21■□□□□ 0.95
LSM4-203ENST00000593829 SGSM1Q2NKQ1 1148 aa21■□□□□ 0.95
LSM4-203ENST00000593829 ZNF699Q32M78 642 aa21■□□□□ 0.95
LSM4-203ENST00000593829 TPGS2Q68CL5 300 aa21■□□□□ 0.95
LSM4-203ENST00000593829 PTCRAQ6ISU1 281 aaPredicted RBP21■□□□□ 0.95
LSM4-203ENST00000593829 C12orf76Q8N812 135 aaPredicted RBP21■□□□□ 0.95
LSM4-203ENST00000593829 SPATA18Q8TC71 538 aa21■□□□□ 0.95
LSM4-203ENST00000593829 MMS19Q96T76 1030 aa21■□□□□ 0.95
LSM4-203ENST00000593829 APOL5Q9BWW9 433 aa21■□□□□ 0.95
LSM4-203ENST00000593829 S1PR5Q9H228 398 aa21■□□□□ 0.95
LSM4-203ENST00000593829 FAM50BQ9Y247 325 aa21■□□□□ 0.95
LSM4-203ENST00000593829 CLSTN1O94985 981 aa20.99■□□□□ 0.95
LSM4-203ENST00000593829 HLA-DRAP01903 254 aa20.99■□□□□ 0.95
LSM4-203ENST00000593829 PIK3CAP42336 1068 aa20.99■□□□□ 0.95
LSM4-203ENST00000593829 ITIH3Q06033 890 aa20.99■□□□□ 0.95
LSM4-203ENST00000593829 LIN9Q5TKA1 542 aa20.99■□□□□ 0.95
LSM4-203ENST00000593829 LIMS2Q7Z4I7 341 aa20.99■□□□□ 0.95
LSM4-203ENST00000593829 ADGRF2Q8IZF7 708 aa20.99■□□□□ 0.95
LSM4-203ENST00000593829 TAF4BQ92750 862 aa20.99■□□□□ 0.95
LSM4-203ENST00000593829 ADAM7Q9H2U9 754 aa20.99■□□□□ 0.95
LSM4-203ENST00000593829 TSC2P49815 1807 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 MBTPS2O43462 519 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 MXI1P50539 228 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 TPM4P67936 248 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 ZNF667Q5HYK9 610 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 RARS2Q5T160 578 aaKnown RBP20.98■□□□□ 0.95
LSM4-203ENST00000593829 CES5AQ6NT32 575 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 TAS1R2Q8TE23 839 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 SLC35C1Q96A29 364 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 RTP3Q9BQQ7 232 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 NXF1Q9UBU9 619 aaKnown RBP20.98■□□□□ 0.95
LSM4-203ENST00000593829 UNC80Q8N2C7 3258 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 GRXCR2A6NFK2 248 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 CCP110O43303 1012 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 NRDCO43847 1150 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 ATF2P15336 505 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 LHX1P48742 406 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 GPR17Q13304 367 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 TERF2Q15554 542 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 E4F1Q66K89 784 aaPredicted RBP20.98■□□□□ 0.95
LSM4-203ENST00000593829 OR10T2Q8NGX3 314 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 IMPG2Q9BZV3 1241 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 DDX43Q9NXZ2 648 aaKnown RBP20.98■□□□□ 0.95
LSM4-203ENST00000593829 AFF4Q9UHB7 1163 aaKnown RBP20.98■□□□□ 0.95
LSM4-203ENST00000593829 MAFFQ9ULX9 164 aa20.98■□□□□ 0.95
LSM4-203ENST00000593829 FAM163BP0C2L3 166 aa20.97■□□□□ 0.95
LSM4-203ENST00000593829 OR4Q2P0C623 313 aa20.97■□□□□ 0.95
LSM4-203ENST00000593829 H2AFXP16104 143 aaPredicted RBP20.97■□□□□ 0.95
LSM4-203ENST00000593829 ELF1P32519 619 aa20.97■□□□□ 0.95
LSM4-203ENST00000593829 MARSP56192 900 aaKnown RBP20.97■□□□□ 0.95
LSM4-203ENST00000593829 MYL7Q01449 175 aa20.97■□□□□ 0.95
LSM4-203ENST00000593829 FBXO38Q6PIJ6 1188 aa20.97■□□□□ 0.95
LSM4-203ENST00000593829 TMC5Q6UXY8 1006 aa20.97■□□□□ 0.95
LSM4-203ENST00000593829 CCDC149Q6ZUS6 474 aa20.97■□□□□ 0.95
LSM4-203ENST00000593829 ZNF771Q7L3S4 317 aaPredicted RBP20.97■□□□□ 0.95
LSM4-203ENST00000593829 RTL10Q7L3V2 364 aa20.97■□□□□ 0.95
LSM4-203ENST00000593829 CMASQ8NFW8 434 aaPredicted RBP20.97■□□□□ 0.95
LSM4-203ENST00000593829 ZDHHC7Q9NXF8 308 aa20.97■□□□□ 0.95
LSM4-203ENST00000593829 USP15Q9Y4E8 981 aaPredicted RBP20.97■□□□□ 0.95
LSM4-203ENST00000593829 GABRDO14764 452 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 RFPL2O75678 378 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 ZMYND10O75800 440 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 ASS1P00966 412 aaKnown RBP20.96■□□□□ 0.95
LSM4-203ENST00000593829 C8AP07357 584 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 BMP1P13497 986 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 P4HA1P13674 534 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 TJAP1Q5JTD0 557 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 RNF19BQ6ZMZ0 732 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 FBXL13Q8NEE6 735 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 PPP1R13BQ96KQ4 1090 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 TMEM209Q96SK2 561 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 ACBD6Q9BR61 282 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 ZCWPW1Q9H0M4 648 aa20.96■□□□□ 0.95
LSM4-203ENST00000593829 CCDC195A0A1B0GUA6 201 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms