RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 RETP07949 1114 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 WEE1P30291 646 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 CDC25CP30307 473 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 WNT7BP56706 349 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 CCINQ13939 588 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 VEPH1Q14D04 833 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 SF3A1Q15459 793 aaKnown RBP17.67■□□□□ 0.42
LIG1-205ENST00000593425 DGKKQ5KSL6 1271 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 WSCD1Q658N2 575 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 LONP2Q86WA8 852 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 SFR1Q86XK3 245 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 SLC46A2Q9BY10 475 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 ST6GALNAC4Q9H4F1 302 aa17.67■□□□□ 0.42
LIG1-205ENST00000593425 HAPLN1P10915 354 aaPredicted RBP17.66■□□□□ 0.42
LIG1-205ENST00000593425 ABCD1P33897 745 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 MCM2P49736 904 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 LARP1BQ659C4 914 aaKnown RBP17.66■□□□□ 0.42
LIG1-205ENST00000593425 SLFN12LQ6IEE8 588 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 USP49Q70CQ1 688 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.66■□□□□ 0.42
LIG1-205ENST00000593425 TMEM150AQ86TG1 271 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 METTL23Q86XA0 190 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 THEM5Q8N1Q8 247 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 STKLD1Q8NE28 680 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 SPPL2BQ8TCT7 592 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 CNTNAP3BQ96NU0 1288 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 GCNAQ96QF7 691 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 CNTNAP3Q9BZ76 1288 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 CCSER1Q9C0I3 900 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 SEMA4GQ9NTN9 838 aa17.66■□□□□ 0.42
LIG1-205ENST00000593425 ABI2Q9NYB9 513 aaPredicted RBP17.66■□□□□ 0.42
LIG1-205ENST00000593425 ZNF638Q14966 1978 aaKnown RBP17.66■□□□□ 0.42
LIG1-205ENST00000593425 RALGAPA1Q6GYQ0 2036 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 PPP1R37O75864 691 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 BMP15O95972 392 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 ADSSP30520 456 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 DDIT3P35638 169 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 GPR15P49685 360 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 PKN3Q6P5Z2 889 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 DYMQ7RTS9 669 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 ZNF720Q7Z2F6 126 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 CMTM8Q8IZV2 173 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 ZSWIM2Q8NEG5 633 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 C2orf15Q8WU43 125 aaKnown RBP17.65■□□□□ 0.42
LIG1-205ENST00000593425 POMGNT1Q8WZA1 660 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 CHFRQ96EP1 664 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 EPSTI1Q96J88 318 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 HPS4Q9NQG7 708 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 TMLHEQ9NVH6 421 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 CCL26Q9Y258 94 aa17.65■□□□□ 0.42
LIG1-205ENST00000593425 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.64■□□□□ 0.41
LIG1-205ENST00000593425 KPNA7A9QM74 516 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 LRP3O75074 770 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 F11P03951 625 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 HMGA1P17096 107 aaKnown RBP17.64■□□□□ 0.41
LIG1-205ENST00000593425 CNR2P34972 360 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 NLRP12P59046 1061 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 KCNA1Q09470 495 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 TAF12Q16514 161 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 ITPRIPL2Q3MIP1 535 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 SV2CQ496J9 727 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 TRIM68Q6AZZ1 485 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 PRR23CQ6ZRP0 262 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 BRAPQ7Z569 592 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 FAM160A2Q8N612 972 aaPredicted RBP17.64■□□□□ 0.41
LIG1-205ENST00000593425 MAB21L3Q8N8X9 362 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 KRI1Q8N9T8 703 aaKnown RBP17.64■□□□□ 0.41
LIG1-205ENST00000593425 RIN3Q8TB24 985 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 NETO1Q8TDF5 533 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 STRA6Q9BX79 667 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 GKN1Q9NS71 199 aa17.64■□□□□ 0.41
LIG1-205ENST00000593425 NCOR2Q9Y618 2525 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 EML5Q05BV3 1969 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 OTOL1A6NHN0 477 aaPredicted RBP17.63■□□□□ 0.41
LIG1-205ENST00000593425 EXTL3O43909 919 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 POU5F1Q01860 360 aaKnown RBP17.63■□□□□ 0.41
LIG1-205ENST00000593425 SMARCB1Q12824 385 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 CSRP2Q16527 193 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 SDHAF4Q5VUM1 108 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 SCARA3Q6AZY7 606 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 WDR5BQ86VZ2 330 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 DCP1BQ8IZD4 617 aaKnown RBP17.63■□□□□ 0.41
LIG1-205ENST00000593425 SYNPOQ8N3V7 929 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 USP13Q92995 863 aaPredicted RBP17.63■□□□□ 0.41
LIG1-205ENST00000593425 HVCN1Q96D96 273 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 FAM84AQ96KN4 292 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 ZNF560Q96MR9 790 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 FAM83CQ9BQN1 747 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 PI4K2AQ9BTU6 479 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 THG1LQ9NWX6 298 aaKnown RBP17.63■□□□□ 0.41
LIG1-205ENST00000593425 PCDHB5Q9Y5E4 795 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 CLIC4Q9Y696 253 aa17.63■□□□□ 0.41
LIG1-205ENST00000593425 GREB1Q4ZG55 1949 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 SLC30A4O14863 429 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 GDF9O60383 454 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 TADA3O75528 432 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 IL18RAPO95256 599 aa17.62■□□□□ 0.41
LIG1-205ENST00000593425 POLR2BP30876 1174 aaKnown RBP17.62■□□□□ 0.41
LIG1-205ENST00000593425 HOXA6P31267 233 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms