RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 AGFG1P52594 562 aaKnown RBP6.07□□□□□ -1.44
SMAD4-216ENST00000593223 VAV2P52735 878 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 POU6F2P78424 691 aaPredicted RBP6.07□□□□□ -1.44
SMAD4-216ENST00000593223 PWP2Q15269 919 aaKnown RBP6.07□□□□□ -1.44
SMAD4-216ENST00000593223 TMED8Q6PL24 325 aaPredicted RBP6.07□□□□□ -1.44
SMAD4-216ENST00000593223 MAEAQ7L5Y9 396 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 FAM46DQ8NEK8 389 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 LARP4BQ92615 738 aaKnown RBP6.07□□□□□ -1.44
SMAD4-216ENST00000593223 NACC2Q96BF6 587 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 PTCD3Q96EY7 689 aaKnown RBP6.07□□□□□ -1.44
SMAD4-216ENST00000593223 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 ZMAT3Q9HA38 289 aaKnown RBP6.07□□□□□ -1.44
SMAD4-216ENST00000593223 DKK2Q9UBU2 259 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 SRRDQ9UH36 339 aa6.07□□□□□ -1.44
SMAD4-216ENST00000593223 A0A1W2PS29 197 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 PHGDHO43175 533 aaKnown RBP6.06□□□□□ -1.44
SMAD4-216ENST00000593223 UNC5CO95185 931 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 CHRM3P20309 590 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 ANXA11P50995 505 aaKnown RBP6.06□□□□□ -1.44
SMAD4-216ENST00000593223 RPS7P62081 194 aaKnown RBP6.06□□□□□ -1.44
SMAD4-216ENST00000593223 FHL2Q14192 279 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 GBX1Q14549 363 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 CNN3Q15417 329 aaKnown RBP6.06□□□□□ -1.44
SMAD4-216ENST00000593223 CD300EQ496F6 205 aaPredicted RBP6.06□□□□□ -1.44
SMAD4-216ENST00000593223 AMOTQ4VCS5 1084 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 HSP90AB2PQ58FF8 381 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 EMC10Q5UCC4 262 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 SRGAP1Q7Z6B7 1085 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 VRK3Q8IV63 474 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 SLC16A11Q8NCK7 471 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 P2RX7Q99572 595 aaKnown RBP6.06□□□□□ -1.44
SMAD4-216ENST00000593223 SCAND2PQ9GZW5 306 aaPredicted RBP6.06□□□□□ -1.44
SMAD4-216ENST00000593223 UNKLQ9H9P5 680 aaKnown RBP6.06□□□□□ -1.44
SMAD4-216ENST00000593223 CASS4Q9NQ75 786 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 TMEM74BQ9NUR3 256 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 CTTNBP2NLQ9P2B4 639 aa6.06□□□□□ -1.44
SMAD4-216ENST00000593223 TMEM191CA6NGB0 347 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 MYO1CO00159 1063 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 SUN1O94901 812 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 ZFPL1O95159 310 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 SLC7A1P30825 629 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 ZEB1P37275 1124 aaPredicted RBP6.05□□□□□ -1.44
SMAD4-216ENST00000593223 CACNB3P54284 484 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 USP14P54578 494 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 MC2RQ01718 297 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 DYRK1AQ13627 763 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 KIAA0753Q2KHM9 967 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 ABHD17BQ5VST6 288 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 FAM160B1Q5W0V3 765 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 DARS2Q6PI48 645 aaKnown RBP6.05□□□□□ -1.44
SMAD4-216ENST00000593223 GPR149Q86SP6 731 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 COL23A1Q86Y22 540 aaPredicted RBP6.05□□□□□ -1.44
SMAD4-216ENST00000593223 KIAA0319LQ8IZA0 1049 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 Q8NA96 180 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 FAM156AQ8NDB6 213 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 PSD4Q8NDX1 1056 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 SUPT20HQ8NEM7 779 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 ASB10Q8WXI3 467 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 SNX19Q92543 992 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 CAVIN3Q969G5 261 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 MRGPRX1Q96LB2 322 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 C8orf48Q96LL4 319 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 TMPRSS5Q9H3S3 457 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 MRPS18AQ9NVS2 196 aaKnown RBP6.05□□□□□ -1.44
SMAD4-216ENST00000593223 VSX1Q9NZR4 365 aaPredicted RBP6.05□□□□□ -1.44
SMAD4-216ENST00000593223 L1RE1Q9UN81 338 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 RAD54BQ9Y620 910 aa6.05□□□□□ -1.44
SMAD4-216ENST00000593223 SETD1AO15047 1707 aaKnown RBP6.05□□□□□ -1.44
SMAD4-216ENST00000593223 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 PIPSLA2A3N6 862 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 A6NNZ2 444 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 CYR61O00622 381 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 TPP1O14773 563 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 GRPP07492 148 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 PIM1P11309 404 aaPredicted RBP6.04□□□□□ -1.44
SMAD4-216ENST00000593223 NPR1P16066 1061 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 FDXRP22570 491 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 ACVRL1P37023 503 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 AVPR1BP47901 424 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 FSTL1Q12841 308 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 KLF10Q13118 480 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 GORABQ5T7V8 394 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 RNF220Q5VTB9 566 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 TAF2Q6P1X5 1199 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 ZNF783Q6ZMS7 281 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 ZNF627Q7L945 461 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 DGKHQ86XP1 1220 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 OR6B3Q8NGW1 331 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 TIFAQ96CG3 184 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 LRIG1Q96JA1 1093 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 INTS13Q9NVM9 706 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 ETAA1Q9NY74 926 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.04□□□□□ -1.44
SMAD4-216ENST00000593223 TPCN1Q9ULQ1 816 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 DMTF1Q9Y222 760 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 PLEKHM1Q9Y4G2 1056 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 KIAA0586Q9BVV6 1533 aa6.04□□□□□ -1.44
SMAD4-216ENST00000593223 ZNF335Q9H4Z2 1342 aaPredicted RBP6.03□□□□□ -1.44
SMAD4-216ENST00000593223 E7ENX8 843 aa6.03□□□□□ -1.44
SMAD4-216ENST00000593223 F5H697 171 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms