RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.37□□□□□ -0.11
VMP1-217ENST00000593168 DDX1Q92499 740 aaKnown RBP14.37□□□□□ -0.11
VMP1-217ENST00000593168 TGS1Q96RS0 853 aaKnown RBP14.37□□□□□ -0.11
VMP1-217ENST00000593168 MIOSQ9NXC5 875 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 MICAL3Q7RTP6 2002 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 FAM163BP0C2L3 166 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 GZMAP12544 262 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 IL9P15248 144 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 CHRNB2P17787 502 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 SCNN1GP51170 649 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 KIF5AQ12840 1032 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 GRIK3Q13003 919 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 LEXMQ3ZCV2 418 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 SV2CQ496J9 727 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 CCDC122Q5T0U0 273 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 ALYREFQ86V81 257 aaKnown RBP14.36□□□□□ -0.11
VMP1-217ENST00000593168 GLYCTKQ8IVS8 523 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 RNF169Q8NCN4 708 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 SLC20A1Q8WUM9 679 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 TSGA10Q9BZW7 698 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 SDCBP2Q9H190 292 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 RNF19AQ9NV58 838 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 TMEM161AQ9NX61 479 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 GDAP2Q9NXN4 497 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 INTUQ9ULD6 942 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 SCN1AP35498 2009 aa14.36□□□□□ -0.11
VMP1-217ENST00000593168 NLRC5Q86WI3 1866 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 ABHD14A-ACY1A0A1B0GW23 586 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 RCCD1A6NED2 376 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 PPEF2O14830 753 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 KRT86O43790 486 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 PAEPP09466 180 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 CD58P19256 250 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 KCNA5P22460 613 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 PAX3P23760 479 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 TAF6P49848 677 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 AFF1P51825 1210 aaKnown RBP14.35□□□□□ -0.11
VMP1-217ENST00000593168 CDH8P55286 799 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 FMO1Q01740 532 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 INCA1Q0VD86 236 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 GLB1LQ6UWU2 654 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 GJD3Q8N144 294 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 DDX27Q96GQ7 796 aaKnown RBP14.35□□□□□ -0.11
VMP1-217ENST00000593168 C17orf80Q9BSJ5 609 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 LACRTQ9GZZ8 138 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 ACP6Q9NPH0 428 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 LZTFL1Q9NQ48 299 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 KANSL3Q9P2N6 904 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 SNX9Q9Y5X1 595 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 MUC6Q6W4X9 2439 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 ATG2AQ2TAZ0 1938 aa14.35□□□□□ -0.11
VMP1-217ENST00000593168 A0A0U1RQJ8 604 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 PRR33A8MZF0 331 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 KPNA7A9QM74 516 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 CILPO75339 1184 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 MMEP08473 750 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 H2AFZP0C0S5 128 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 TNNT1P13805 278 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 GNA15P30679 374 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 LILRA4P59901 499 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 ETF1P62495 437 aaKnown RBP14.34□□□□□ -0.11
VMP1-217ENST00000593168 TUSC3Q13454 348 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 IKBKEQ14164 716 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 TAF3Q5VWG9 929 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 SCARA5Q6ZMJ2 495 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 TRIM72Q6ZMU5 477 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.34□□□□□ -0.113e-6■■■■□ 19.8
VMP1-217ENST00000593168 H2AFVQ71UI9 128 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 DPH6Q7L8W6 267 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 LIMS2Q7Z4I7 341 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 WHAMMQ8TF30 809 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 ATRIPQ8WXE1 791 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 RSPH1Q8WYR4 309 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 C16orf45Q96MC5 204 aaPredicted RBP14.34□□□□□ -0.11
VMP1-217ENST00000593168 UROC1Q96N76 676 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 MMS19Q96T76 1030 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 PCDHB18PQ96TA0 734 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 ISCUQ9H1K1 167 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 SMYD3Q9H7B4 428 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 GOLGA2P5Q9HBQ8 144 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 MYO1AQ9UBC5 1043 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 KIAA1257Q9ULG3 409 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 BARX2Q9UMQ3 279 aaPredicted RBP14.34□□□□□ -0.11
VMP1-217ENST00000593168 PCDHB7Q9Y5E2 793 aa14.34□□□□□ -0.11
VMP1-217ENST00000593168 BTNL10A8MVZ5 291 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 PODXLO00592 558 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 SPTLC1O15269 473 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 KIF5CO60282 957 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 RTN2O75298 545 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 TACC1O75410 805 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 POMCP01189 267 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 RAP1GAPP47736 663 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 RAD23BP54727 409 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 PTCRAQ6ISU1 281 aaPredicted RBP14.33□□□□□ -0.12
VMP1-217ENST00000593168 PPP1R2P3Q6NXS1 205 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 UNC93AQ86WB7 457 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 PALB2Q86YC2 1186 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 TOP6BLQ8N6T0 577 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 FBXO22Q8NEZ5 403 aa14.33□□□□□ -0.12
VMP1-217ENST00000593168 URGCPQ8TCY9 931 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms