RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 TFIP11Q9UBB9 837 aaKnown RBP19.33■□□□□ 0.68
CIRBP-243ENST00000593128 RIF1Q5UIP0 2472 aaKnown RBP19.33■□□□□ 0.68
CIRBP-243ENST00000593128 LDHAP00338 332 aaKnown RBP19.32■□□□□ 0.68
CIRBP-243ENST00000593128 ACAT1P24752 427 aaKnown RBP19.32■□□□□ 0.68
CIRBP-243ENST00000593128 PNPLA4P41247 253 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 FZD5Q13467 585 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 CSGALNACT2Q8N6G5 542 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 STKLD1Q8NE28 680 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 SPPL2BQ8TCT7 592 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 HPS3Q969F9 1004 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 PI4K2AQ9BTU6 479 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 OLFML3Q9NRN5 406 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 ZSCAN32Q9NX65 697 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 MAGED2Q9UNF1 606 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-243ENST00000593128 R3HCC1Q9Y3T6 440 aaKnown RBP19.32■□□□□ 0.68
CIRBP-243ENST00000593128 PCDHB5Q9Y5E4 795 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 PCDHGA2Q9Y5H1 932 aa19.32■□□□□ 0.68
CIRBP-243ENST00000593128 KIF26AQ9ULI4 1882 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-243ENST00000593128 CHADO15335 359 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 HUS1O60921 280 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 PRPF40AO75400 957 aaKnown RBP19.31■□□□□ 0.68
CIRBP-243ENST00000593128 PRAMEF12O95522 483 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 TMEM191BP0C7N4 346 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 HAPLN1P10915 354 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-243ENST00000593128 GARTP22102 1010 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 CDC25CP30307 473 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 GPR15P49685 360 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 POU5F1Q01860 360 aaKnown RBP19.31■□□□□ 0.68
CIRBP-243ENST00000593128 ALCAMQ13740 583 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 SDHAF4Q5VUM1 108 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 LMBRD2Q68DH5 695 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-243ENST00000593128 NT5DC4Q86YG4 428 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 PDCL2Q8N4E4 241 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 C1orf127Q8N9H9 656 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 TTC16Q8NEE8 873 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 C2orf15Q8WU43 125 aaKnown RBP19.31■□□□□ 0.68
CIRBP-243ENST00000593128 DHX58Q96C10 678 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 BORCS6Q96GS4 357 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 MKNK1Q9BUB5 465 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 MTMR12Q9C0I1 747 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 TMEM206Q9H813 350 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 PDE11AQ9HCR9 933 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 TRPV5Q9NQA5 729 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 TMLHEQ9NVH6 421 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 DDX43Q9NXZ2 648 aaKnown RBP19.31■□□□□ 0.68
CIRBP-243ENST00000593128 HSFX1Q9UBD0 423 aa19.31■□□□□ 0.68
CIRBP-243ENST00000593128 SPTLC2O15270 562 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 EXTL3O43909 919 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 PPP2R5DQ14738 602 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 SCARA3Q6AZY7 606 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 STXBP4Q6ZWJ1 553 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 GLIS3Q8NEA6 775 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 ZNF396Q96N95 335 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-243ENST00000593128 LRRC3BQ96PB8 259 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 BACH2Q9BYV9 841 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 CHRDQ9H2X0 955 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 TASP1Q9H6P5 420 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 PRMT8Q9NR22 394 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-243ENST00000593128 RBM12Q9NTZ6 932 aaKnown RBP19.3■□□□□ 0.68
CIRBP-243ENST00000593128 GTSE1Q9NYZ3 720 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 L1RE1Q9UN81 338 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 SNX9Q9Y5X1 595 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 FRYLO94915 3013 aa19.3■□□□□ 0.68
CIRBP-243ENST00000593128 ZNF638Q14966 1978 aaKnown RBP19.3■□□□□ 0.68
CIRBP-243ENST00000593128 WDR87Q6ZQQ6 2873 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-243ENST00000593128 ARNTLO00327 626 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 NASPP49321 788 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-243ENST00000593128 ASIC1P78348 528 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 MYL7Q01449 175 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 FCHO2Q0JRZ9 810 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 SMARCB1Q12824 385 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 ARHGAP29Q52LW3 1261 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 GPD1LQ8N335 351 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 SUMF1Q8NBK3 374 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 LINC00301Q8NCQ3 95 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 BPIFB1Q8TDL5 484 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 ITGA11Q9UKX5 1188 aa19.29■□□□□ 0.68
CIRBP-243ENST00000593128 SMG5Q9UPR3 1016 aaKnown RBP19.29■□□□□ 0.68
CIRBP-243ENST00000593128 FRMD3A2A2Y4 597 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 SPECC1L-ADORA2AF8WAN1 911 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 HSP90AA1P07900 732 aaKnown RBP19.28■□□□□ 0.68
CIRBP-243ENST00000593128 CCR3P51677 355 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 RBP5P82980 135 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 TNK2Q07912 1038 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 LRRC32Q14392 662 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 LPAL2Q16609 132 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 DDR2Q16832 855 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 ZNF687Q8N1G0 1237 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 MAB21L3Q8N8X9 362 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 SECISBP2LQ93073 1101 aaKnown RBP19.28■□□□□ 0.68
CIRBP-243ENST00000593128 ANKRD36BP1Q96IX9 119 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 SLC46A2Q9BY10 475 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 LRRC27Q9C0I9 530 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 TNMDQ9H2S6 317 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 C8orf33Q9H7E9 229 aaPredicted RBP19.28■□□□□ 0.68
CIRBP-243ENST00000593128 IL21Q9HBE4 155 aa19.28■□□□□ 0.68
CIRBP-243ENST00000593128 THG1LQ9NWX6 298 aaKnown RBP19.28■□□□□ 0.68
CIRBP-243ENST00000593128 HCRTO43612 131 aa19.27■□□□□ 0.68
CIRBP-243ENST00000593128 TNNC2P02585 160 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms