RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 AP3M2P53677 418 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 DSG1Q02413 1049 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 ZP2Q05996 745 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 GSE1Q14687 1217 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 ARHGAP44Q17R89 818 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 SOWAHAQ2M3V2 549 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 USP41Q3LFD5 358 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 WDR72Q3MJ13 1102 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 RARS2Q5T160 578 aaKnown RBP10.33□□□□□ -0.76
DDX39A-220ENST00000593008 FKBP15Q5T1M5 1219 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 FAM171A1Q5VUB5 890 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 KIAA0319Q5VV43 1072 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 DCLRE1AQ6PJP8 1040 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 PRSS55Q6UWB4 352 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-220ENST00000593008 RSPO2Q6UXX9 243 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-220ENST00000593008 TMEM184AQ6ZMB5 413 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 SPATA31D4Q6ZUB0 917 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 USP37Q86T82 979 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 VSTM4Q8IW00 320 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 GJD3Q8N144 294 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 PPM1KQ8N3J5 372 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 PDCL2Q8N4E4 241 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 LRRC52Q8N7C0 313 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 UBR7Q8N806 425 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 SLC22A17Q8WUG5 538 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.76
DDX39A-220ENST00000593008 PCMTD1Q96MG8 357 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-220ENST00000593008 ZNF560Q96MR9 790 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 UROC1Q96N76 676 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 TMEM209Q96SK2 561 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 ANP32EQ9BTT0 268 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 GPR88Q9GZN0 384 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 NIF3L1Q9GZT8 377 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 S1PR5Q9H228 398 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 DPEP3Q9H4B8 488 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 NLRC4Q9NPP4 1024 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 CHST7Q9NS84 486 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 STK39Q9UEW8 545 aa10.33□□□□□ -0.76
DDX39A-220ENST00000593008 SPDYE4A6NLX3 237 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 KPNA7A9QM74 516 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 TMEM189-UBE2V1I3L0A0 370 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 CYB561D2O14569 222 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 P4HA2O15460 535 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 ADAM12O43184 909 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 OR4Q2P0C623 313 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 ACO1P21399 889 aaKnown RBP10.32□□□□□ -0.76
DDX39A-220ENST00000593008 LMO2P25791 158 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 RPL9P32969 192 aaKnown RBP10.32□□□□□ -0.76
DDX39A-220ENST00000593008 CLCN4P51793 760 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 PSMC1P62191 440 aaKnown RBP10.32□□□□□ -0.76
DDX39A-220ENST00000593008 CUL2Q13617 745 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 SV2CQ496J9 727 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 ZNF667Q5HYK9 610 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 KLHDC7AQ5VTJ3 777 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 TMC5Q6UXY8 1006 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 DSTYKQ6XUX3 929 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 TMC6Q7Z403 805 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 PALB2Q86YC2 1186 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 ADHFE1Q8IWW8 467 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 SPC24Q8NBT2 197 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 OR10T2Q8NGX3 314 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
DDX39A-220ENST00000593008 RPGRIP1Q96KN7 1286 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 NT5C1BQ96P26 610 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 ERGIC2Q96RQ1 377 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 MMS19Q96T76 1030 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 NAA15Q9BXJ9 866 aaKnown RBP10.32□□□□□ -0.76
DDX39A-220ENST00000593008 TTYH3Q9C0H2 523 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 UBE2TQ9NPD8 197 aaPredicted RBP10.32□□□□□ -0.76
DDX39A-220ENST00000593008 APEX2Q9UBZ4 518 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 DNAJC12Q9UKB3 198 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 SSX2IPQ9Y2D8 614 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 NCOR1O75376 2440 aa10.32□□□□□ -0.76
DDX39A-220ENST00000593008 GTPBP10A4D1E9 387 aaKnown RBP10.31□□□□□ -0.76
DDX39A-220ENST00000593008 M0QZQ0 153 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 PMM2O15305 246 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 ATP2C2O75185 946 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 STAU1O95793 577 aaKnown RBP10.31□□□□□ -0.76
DDX39A-220ENST00000593008 GYPCP04921 128 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 ADH1AP07327 375 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 TPM2P07951 284 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 HOXB8P17481 243 aaPredicted RBP10.31□□□□□ -0.76
DDX39A-220ENST00000593008 POLR2FP61218 127 aaKnown RBP10.31□□□□□ -0.76
DDX39A-220ENST00000593008 TNNC1P63316 161 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 RAPGEF1Q13905 1077 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 CBX2Q14781 532 aaPredicted RBP10.31□□□□□ -0.76
DDX39A-220ENST00000593008 SGSM1Q2NKQ1 1148 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 FILIP1LQ4L180 1135 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 ZNF394Q53GI3 561 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 LIMS2Q7Z4I7 341 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 PPFIBP1Q86W92 1011 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 ADGRF2Q8IZF7 708 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 WHAMMQ8TF30 809 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 CPLX3Q8WVH0 158 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 SUSD6Q92537 303 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 BAP1Q92560 729 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 SUSD3Q96L08 255 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 TSPAN18Q96SJ8 248 aa10.31□□□□□ -0.76
DDX39A-220ENST00000593008 TTPALQ9BTX7 342 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms