RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CAPN11Q9UMQ6 739 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 LUC7L2Q9Y383 392 aaKnown RBP12.76□□□□□ -0.37
DDX39A-219ENST00000592927 NR2E1Q9Y466 385 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
DDX39A-219ENST00000592927 PTPRJQ12913 1337 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 RALGAPA2Q2PPJ7 1873 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 NLRC5Q86WI3 1866 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 C2CD4DB7Z1M9 353 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 F8W810 466 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 TMEM189-UBE2V1I3L0A0 370 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 PHACTR2O75167 634 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 KIF4AO95239 1232 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 ITGB3P05106 788 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 ASGR2P07307 311 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 KRT19P08727 400 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 AOC1P19801 751 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 POLR2BP30876 1174 aaKnown RBP12.75□□□□□ -0.37
DDX39A-219ENST00000592927 CASP14P31944 242 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 RBP5P82980 135 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 PLCB3Q01970 1234 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 KCNMA1Q12791 1236 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 BIRC3Q13489 604 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 ARID5BQ14865 1188 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 TSR1Q2NL82 804 aaKnown RBP12.75□□□□□ -0.37
DDX39A-219ENST00000592927 C1orf220Q5T0J3 134 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 TMEM130Q8N3G9 435 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 C1orf127Q8N9H9 656 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 TC2NQ8N9U0 490 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 HASPINQ8TF76 798 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 ZNF516Q92618 1163 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 NAA15Q9BXJ9 866 aaKnown RBP12.75□□□□□ -0.37
DDX39A-219ENST00000592927 NUCKS1Q9H1E3 243 aaKnown RBP12.75□□□□□ -0.37
DDX39A-219ENST00000592927 KCNF1Q9H3M0 494 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 MMRN2Q9H8L6 949 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 STK39Q9UEW8 545 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 ADAM28Q9UKQ2 775 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 AGAP1Q9UPQ3 857 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
DDX39A-219ENST00000592927 CITO14578 2027 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 ANK1P16157 1881 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 SF3B1O75533 1304 aaKnown RBP eCLIP12.74□□□□□ -0.372e-7■■■■■ 68.9
DDX39A-219ENST00000592927 ANO9A1A5B4 782 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 PIRO00625 290 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 TRAPPC3O43617 180 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
DDX39A-219ENST00000592927 NPR3P17342 541 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 PAX3P23760 479 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 GCLMP48507 274 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 ATXN1P54253 815 aaKnown RBP12.74□□□□□ -0.37
DDX39A-219ENST00000592927 ZBED6P86452 979 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 UBE3AQ05086 875 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 TRPC3Q13507 836 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 DUSP6Q16828 381 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 KIAA0319Q5VV43 1072 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 ANKRD54Q6NXT1 300 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 FUT10Q6P4F1 479 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 DDX53Q86TM3 631 aaKnown RBP12.74□□□□□ -0.37
DDX39A-219ENST00000592927 C3orf58Q8NDZ4 430 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 OR8K1Q8NGG5 319 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 BCL7CQ8WUZ0 217 aaPredicted RBP12.74□□□□□ -0.37
DDX39A-219ENST00000592927 ZNF560Q96MR9 790 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 TMEM8AQ9HCN3 771 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 CEP72Q9P209 647 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 CDH22Q9UJ99 828 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 LZTS1Q9Y250 596 aa12.74□□□□□ -0.37
DDX39A-219ENST00000592927 TDRD15B5MCY1 1934 aaKnown RBP12.73□□□□□ -0.37
DDX39A-219ENST00000592927 PPEF2O14830 753 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 RFX1P22670 979 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 FECHP22830 423 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 IGFBP6P24592 240 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-219ENST00000592927 MSNP26038 577 aaKnown RBP12.73□□□□□ -0.37
DDX39A-219ENST00000592927 KRT9P35527 623 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 PNPLA4P41247 253 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 TAF6P49848 677 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 MXI1P50539 228 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 ADKP55263 362 aaKnown RBP12.73□□□□□ -0.37
DDX39A-219ENST00000592927 LILRA4P59901 499 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 MYL7Q01449 175 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 PPP3CAQ08209 521 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 ELAVL2Q12926 359 aaKnown RBP12.73□□□□□ -0.37
DDX39A-219ENST00000592927 MYO1EQ12965 1108 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 BMS1Q14692 1282 aaKnown RBP12.73□□□□□ -0.37
DDX39A-219ENST00000592927 ACAP1Q15027 740 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 ZACNQ401N2 412 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
DDX39A-219ENST00000592927 KRT39Q6A163 491 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 SYCE2Q6PIF2 218 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 CACNA2D4Q7Z3S7 1137 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 VPS52Q8N1B4 723 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 LRRC52Q8N7C0 313 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-219ENST00000592927 DNAJC7Q99615 494 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 BAG1Q99933 345 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-219ENST00000592927 RTP3Q9BQQ7 232 aa12.73□□□□□ -0.37
DDX39A-219ENST00000592927 LSM14BQ9BX40 385 aaKnown RBP12.73□□□□□ -0.37
DDX39A-219ENST00000592927 ABHD10Q9NUJ1 306 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms