RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 GTSE1Q9NYZ3 720 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 IGSF9BQ9UPX0 1349 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 GTPBP10A4D1E9 387 aaKnown RBP13.32□□□□□ -0.28
DNMT1-228ENST00000592705 MEA1Q16626 185 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 BTNL9Q6UXG8 535 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 KIAA0895Q8NCT3 520 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 SH2D3AQ9BRG2 576 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 NLRP11P59045 1033 aaKnown RBP13.32□□□□□ -0.28
DNMT1-228ENST00000592705 WDR72Q3MJ13 1102 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 Q4G0T1 1027 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 CES5AQ6NT32 575 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 ZNF571Q7Z3V5 609 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-228ENST00000592705 TNS4Q8IZW8 715 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 SLC26A7Q8TE54 656 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 PDCD6IPQ8WUM4 868 aaKnown RBP13.32□□□□□ -0.28
DNMT1-228ENST00000592705 STAMBPL1Q96FJ0 436 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 SLITRK1Q96PX8 696 aa13.32□□□□□ -0.28
DNMT1-228ENST00000592705 FOXN3O00409 490 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 PSTPIP1O43586 416 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 CYP2C8P10632 490 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 EEF1B2P24534 225 aaKnown RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 ARL4DP49703 201 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 EMC2Q15006 297 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 MYLK4Q86YV6 388 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 SAMD3Q8N6K7 520 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 ARMC2Q8NEN0 867 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 RDM1Q8NG50 284 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 FEZF2Q8TBJ5 459 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 C17orf75Q9HAS0 396 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 ZC3H7BQ9UGR2 993 aaKnown RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 SUN2Q9UH99 717 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 PPP1R12AO14974 1030 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 GAS2O43903 313 aaKnown RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 MGEA5O60502 916 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 GLI1P08151 1106 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 MCF2P10911 925 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 RARGP13631 454 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 STMN1P16949 149 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 SREBF1P36956 1147 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 RBP5P82980 135 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 IL1RL1Q01638 556 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 ELAVL2Q12926 359 aaKnown RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 ZNF484Q5JVG2 852 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 CYB5D1Q6P9G0 228 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 TTC8Q8TAM2 541 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 ACER1Q8TDN7 264 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 ASCC2Q9H1I8 757 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 SLC24A3Q9HC58 644 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 KCNH7Q9NS40 1196 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 FBXO28Q9NVF7 368 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 AIPL1Q9NZN9 384 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 WHRNQ9P202 907 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 BCL9O00512 1426 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 MOCS2O96007 188 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 TCF7P36402 384 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 AARSP49588 968 aaKnown RBP eCLIP13.31□□□□□ -0.283e-8■■□□□ 12.6
DNMT1-228ENST00000592705 MORF4L2Q15014 288 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 UNC45AQ9H3U1 944 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 IGF2BP3O00425 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 GZMAP12544 262 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 APLP1P51693 650 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 SLC12A1Q13621 1099 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 MTHFD1LQ6UB35 978 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 CCNYL1Q8N7R7 359 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 MRPS31Q92665 395 aaKnown RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 DUSP9Q99956 384 aaKnown RBP13.31□□□□□ -0.28
DNMT1-228ENST00000592705 TRPV6Q9H1D0 765 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 ZFATQ9P243 1243 aa13.31□□□□□ -0.28
DNMT1-228ENST00000592705 PIK3R2O00459 728 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 ENO1P06733 434 aaKnown RBP13.3□□□□□ -0.28
DNMT1-228ENST00000592705 YWHAHQ04917 246 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-228ENST00000592705 PTK7Q13308 1070 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 AENQ8WTP8 325 aaKnown RBP13.3□□□□□ -0.28
DNMT1-228ENST00000592705 MAGEB5Q9BZ81 275 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 CYP4F11Q9HBI6 524 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 TBX20Q9UMR3 447 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 RSPH10B2B2RC85 870 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 MAP2K7O14733 419 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 PJA2O43164 708 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 RSPH10BP0C881 870 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 ADORA2BP29275 332 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 PRKCEQ02156 737 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 IKBKEQ14164 716 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 FBXO16Q8IX29 292 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-228ENST00000592705 CATSPER1Q8NEC5 780 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 RTFDC1Q9BY42 306 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-228ENST00000592705 CXorf56Q9H5V9 222 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 NOD2Q9HC29 1040 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 PDGFRAP16234 1089 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 ALDH18A1P54886 795 aaKnown RBP13.3□□□□□ -0.28
DNMT1-228ENST00000592705 STX3Q13277 289 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 CCDC157Q569K6 752 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 LVRNQ6Q4G3 990 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 C3orf62Q6ZUJ4 267 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 PPIL6Q8IXY8 311 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 MTMR8Q96EF0 704 aa13.3□□□□□ -0.28
DNMT1-228ENST00000592705 FGD4Q96M96 766 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms