RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 TAF12Q16514 161 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 DGKKQ5KSL6 1271 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 GPR158Q5T848 1215 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 WSCD1Q658N2 575 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 SYCP3Q8IZU3 236 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 FAM200AQ8TCP9 573 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 SEPT5Q99719 369 aaPredicted RBP20.33■□□□□ 0.85
CCDC43-205ENST00000592333 ACBD6Q9BR61 282 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 FAM213AQ9BRX8 229 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 CUEDC2Q9H467 287 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 LMAN1LQ9HAT1 526 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 ABCB6Q9NP58 842 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 ITGA11Q9UKX5 1188 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 NDRG2Q9UN36 371 aaKnown RBP20.33■□□□□ 0.85
CCDC43-205ENST00000592333 MTMR6Q9Y217 621 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 PCDHB5Q9Y5E4 795 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 MYBPHLA2RUH7 354 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 EXTL3O43909 919 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 PAPSS2O95340 614 aaPredicted RBP20.32■□□□□ 0.84
CCDC43-205ENST00000592333 CHRNB1P11230 501 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 IDEP14735 1019 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 ATF6P18850 670 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 TSPY1Q01534 308 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 KCNA1Q09470 495 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 LRRTM3Q86VH5 581 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 CCDC65Q8IXS2 484 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 SYNPOQ8N3V7 929 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 TTC9BQ8N6N2 239 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 BPIFB1Q8TDL5 484 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 RSPRY1Q96DX4 576 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 USP28Q96RU2 1077 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 HINFPQ9BQA5 517 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 TNMDQ9H2S6 317 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 IL21Q9HBE4 155 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 PANK4Q9NVE7 773 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 THG1LQ9NWX6 298 aaKnown RBP20.32■□□□□ 0.84
CCDC43-205ENST00000592333 GDAP2Q9NXN4 497 aa20.32■□□□□ 0.84
CCDC43-205ENST00000592333 RBAKQ9NYW8 714 aaPredicted RBP20.32■□□□□ 0.84
CCDC43-205ENST00000592333 NUP210Q8TEM1 1887 aaPredicted RBP20.32■□□□□ 0.84
CCDC43-205ENST00000592333 TICRRQ7Z2Z1 1910 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 NCANO14594 1321 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 STX6O43752 255 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 HUS1O60921 280 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 PPP6R2O75170 966 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 TDGF1P13385 188 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 SDHBP21912 280 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 CCNE1P24864 410 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 TFAMQ00059 246 aaKnown RBP20.31■□□□□ 0.84
CCDC43-205ENST00000592333 SURF1Q15526 300 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 DPH6Q7L8W6 267 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 SPEM1Q8N4L4 309 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 CELF5Q8N6W0 485 aaKnown RBP20.31■□□□□ 0.84
CCDC43-205ENST00000592333 FRYLO94915 3013 aa20.31■□□□□ 0.84
CCDC43-205ENST00000592333 CACNA1AO00555 2505 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 DCHS1Q96JQ0 3298 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 CSH1P0DML2 217 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 CSH2P0DML3 217 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 CXCL12P48061 93 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 KPNA1P52294 538 aaPredicted RBP20.3■□□□□ 0.84
CCDC43-205ENST00000592333 RBP5P82980 135 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 AMPD3Q01432 767 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 CEBPZQ03701 1054 aaKnown RBP20.3■□□□□ 0.84
CCDC43-205ENST00000592333 STXBP5Q5T5C0 1151 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 FAM173BQ6P4H8 233 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 CNNM4Q6P4Q7 775 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 KIAA2013Q8IYS2 634 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 GPD1LQ8N335 351 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 TOP6BLQ8N6T0 577 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 C1orf127Q8N9H9 656 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 LINC00301Q8NCQ3 95 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 CXorf38Q8TB03 319 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 LPIN3Q9BQK8 851 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 KIF9Q9HAQ2 790 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 KIAA1586Q9HCI6 787 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 TBC1D7Q9P0N9 293 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 NCDNQ9UBB6 729 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 UXTQ9UBK9 157 aaPredicted RBP20.3■□□□□ 0.84
CCDC43-205ENST00000592333 AGAP1Q9UPQ3 857 aa20.3■□□□□ 0.84
CCDC43-205ENST00000592333 K7ELQ4 463 aaPredicted RBP20.29■□□□□ 0.84
CCDC43-205ENST00000592333 SOAT2O75908 522 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 ITGB3P05106 788 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 POLR2BP30876 1174 aaKnown RBP20.29■□□□□ 0.84
CCDC43-205ENST00000592333 CTHP32929 405 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 CNR2P34972 360 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 LHX1P48742 406 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 CASP5P51878 434 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 RPL10AP62906 217 aaKnown RBP20.29■□□□□ 0.84
CCDC43-205ENST00000592333 MYL7Q01449 175 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 PUM1Q14671 1186 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC43-205ENST00000592333 CMTM8Q8IZV2 173 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 PDCL2Q8N4E4 241 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 FUBP3Q96I24 572 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC43-205ENST00000592333 CEP295NLQ96MC4 621 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 IKZF4Q9H2S9 585 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 KBTBD4Q9NVX7 518 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 ABI2Q9NYB9 513 aaPredicted RBP20.29■□□□□ 0.84
CCDC43-205ENST00000592333 TCHHQ07283 1943 aa20.29■□□□□ 0.84
CCDC43-205ENST00000592333 SPECC1L-ADORA2AF8WAN1 911 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 GABRDO14764 452 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 EIF3DO15371 548 aaKnown RBP eCLIP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms