RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 RCOR2Q8IZ40 523 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 RBM41Q96IZ5 413 aaKnown RBP16.67■□□□□ 0.26
MBD1-227ENST00000592060 TWNKQ96RR1 684 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 ZNF408Q9H9D4 720 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 KLHL11Q9NVR0 708 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 RSPH14Q9UHP6 348 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 IVNS1ABPQ9Y6Y0 642 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 H3BRB1 525 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 MED7O43513 233 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 TSPAN1O60635 241 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 ITGBL1O95965 494 aaPredicted RBP16.66■□□□□ 0.26
MBD1-227ENST00000592060 KRT1P04264 644 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 TMOD1P28289 359 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 ATICP31939 592 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 PTPN7P35236 360 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 MAGOHP61326 146 aaKnown RBP16.66■□□□□ 0.26
MBD1-227ENST00000592060 PIGHQ14442 188 aaPredicted RBP16.66■□□□□ 0.26
MBD1-227ENST00000592060 KYAT1Q16773 422 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 WDR72Q3MJ13 1102 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 MARCH8Q5T0T0 291 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 DCUN1D2Q6PH85 259 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 GPR142Q7Z601 462 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 SRLQ86TD4 932 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 SLC4A11Q8NBS3 891 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 PGM2Q96G03 612 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 MAML3Q96JK9 1138 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 CCDC114Q96M63 670 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 ELOVL4Q9GZR5 314 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 EPN3Q9H201 632 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 RABEP2Q9H5N1 569 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 TUT1Q9H6E5 874 aaKnown RBP16.66■□□□□ 0.26
MBD1-227ENST00000592060 HMGXB4Q9UGU5 601 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 FEZ2Q9UHY8 353 aaPredicted RBP16.66■□□□□ 0.26
MBD1-227ENST00000592060 STRIP2Q9ULQ0 834 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 PI4K2BG5E9Z4 385 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 CILPO75339 1184 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 MMP3P08254 477 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 CD19P15391 556 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 SMPD1P17405 629 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 CCT5P48643 541 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 ADCY2Q08462 1091 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 MKRN3Q13064 507 aaKnown RBP16.66■□□□□ 0.26
MBD1-227ENST00000592060 GRIK4Q16099 956 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 DUSP28Q4G0W2 176 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 MFSD7Q6UXD7 560 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 TRMT10CQ7L0Y3 403 aaKnown RBP16.66■□□□□ 0.26
MBD1-227ENST00000592060 TJP2Q9UDY2 1190 aa16.66■□□□□ 0.26
MBD1-227ENST00000592060 KAT6AQ92794 2004 aa16.65■□□□□ 0.26
MBD1-227ENST00000592060 ATF2P15336 505 aa16.65■□□□□ 0.26
MBD1-227ENST00000592060 CHKAP35790 457 aa16.65■□□□□ 0.26
MBD1-227ENST00000592060 ITGA8P53708 1063 aa16.65■□□□□ 0.26
MBD1-227ENST00000592060 PTPN11Q06124 597 aaPredicted RBP16.65■□□□□ 0.26
MBD1-227ENST00000592060 TRIP13Q15645 432 aaPredicted RBP16.65■□□□□ 0.26
MBD1-227ENST00000592060 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
MBD1-227ENST00000592060 TXNRD3NBQ6F5E7 133 aa16.65■□□□□ 0.26
MBD1-227ENST00000592060 SPOCD1Q6ZMY3 1216 aa16.65■□□□□ 0.26
MBD1-227ENST00000592060 FAM118BQ9BPY3 351 aa16.65■□□□□ 0.26
MBD1-227ENST00000592060 CDC42EP4Q9H3Q1 356 aaKnown RBP16.65■□□□□ 0.26
MBD1-227ENST00000592060 CYP3A43Q9HB55 503 aa16.65■□□□□ 0.26
MBD1-227ENST00000592060 RRP15Q9Y3B9 282 aaKnown RBP16.65■□□□□ 0.26
MBD1-227ENST00000592060 SIGLEC16A6NMB1 481 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 KLRC2P26717 231 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 POLR2BP30876 1174 aaKnown RBP16.64■□□□□ 0.25
MBD1-227ENST00000592060 CETN2P41208 172 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 COPS2P61201 443 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 CAV1Q03135 178 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 ORC1Q13415 861 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 TMEM132DQ14C87 1099 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 DRICH1Q6PGQ1 229 aaPredicted RBP16.64■□□□□ 0.25
MBD1-227ENST00000592060 NLRP7Q8WX94 980 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 C2CD2Q9Y426 696 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 TRIP11Q15643 1979 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 hCG_1818297A0A087WSY0 165 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 A0A1B0GUA9 196 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 LIASO43766 372 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 STAU1O95793 577 aaKnown RBP16.64■□□□□ 0.25
MBD1-227ENST00000592060 KRT10P13645 584 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 BYSLQ13895 437 aaKnown RBP16.64■□□□□ 0.25
MBD1-227ENST00000592060 CROCCP2Q86T23 111 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 ZNF410Q86VK4 478 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 CCDC25Q86WR0 208 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 KIAA0319LQ8IZA0 1049 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 OR6J1Q8NGC5 347 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 JOSD2Q8TAC2 188 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 TMEM176AQ96HP8 235 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 SCLT1Q96NL6 688 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 CPXM1Q96SM3 734 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 TRAIPQ9BWF2 469 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 DDX56Q9NY93 547 aaKnown RBP16.64■□□□□ 0.25
MBD1-227ENST00000592060 ITGA11Q9UKX5 1188 aa16.64■□□□□ 0.25
MBD1-227ENST00000592060 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.64■□□□□ 0.25
MBD1-227ENST00000592060 GOLGA8SH3BPF8 625 aa16.63■□□□□ 0.25
MBD1-227ENST00000592060 ADCY6O43306 1168 aa16.63■□□□□ 0.25
MBD1-227ENST00000592060 MICAL2O94851 1124 aa16.63■□□□□ 0.25
MBD1-227ENST00000592060 ERBB2P04626 1255 aa16.63■□□□□ 0.25
MBD1-227ENST00000592060 RFC1P35251 1148 aaPredicted RBP16.63■□□□□ 0.25
MBD1-227ENST00000592060 SLC25A11Q02978 314 aaKnown RBP16.63■□□□□ 0.25
MBD1-227ENST00000592060 INCA1Q0VD86 236 aa16.63■□□□□ 0.25
MBD1-227ENST00000592060 ODF2Q5BJF6 829 aa16.63■□□□□ 0.25
MBD1-227ENST00000592060 TNFAIP8L3Q5GJ75 292 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms