RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 BICDL2A1A5D9 508 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 PRR33A8MZF0 331 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 IKBKBO14920 756 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 AKAP3O75969 853 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 C4BPAP04003 597 aaKnown RBP10.79□□□□□ -0.68
BRCA1-227ENST00000591849 ASGR2P07307 311 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 RHOP08100 348 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 ACAT1P24752 427 aaKnown RBP10.79□□□□□ -0.68
BRCA1-227ENST00000591849 CCNE1P24864 410 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 DLG4P78352 724 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 LRRC63Q05C16 580 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 PTPN21Q16825 1174 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 SOWAHAQ2M3V2 549 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 COBLL1Q53SF7 1204 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 TCERG1LQ5VWI1 586 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 TDRD10Q5VZ19 366 aaKnown RBP10.79□□□□□ -0.68
BRCA1-227ENST00000591849 ANKRD40Q6AI12 368 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 SCARA3Q6AZY7 606 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 SV2AQ7L0J3 742 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 SPATA2LQ8IUW3 424 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-227ENST00000591849 ADSSL1Q8N142 457 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 CXorf38Q8TB03 319 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 SPPL2BQ8TCT7 592 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 PLEKHO2Q8TD55 490 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 C2orf15Q8WU43 125 aaKnown RBP10.79□□□□□ -0.68
BRCA1-227ENST00000591849 ING5Q8WYH8 240 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 EEF2KMTQ96G04 330 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 GCNAQ96QF7 691 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 MYADMQ96S97 322 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 MKNK1Q9BUB5 465 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 DNAI2Q9GZS0 605 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 ASAH2Q9NR71 780 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 CDH7Q9ULB5 785 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 SORCS3Q9UPU3 1222 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 ASB3Q9Y575 518 aa10.79□□□□□ -0.68
BRCA1-227ENST00000591849 ZFP37Q9Y6Q3 630 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-227ENST00000591849 A8MXQ7 604 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 SOAT2O75908 522 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 FAM163BP0C2L3 166 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 TRIM49P0CI25 452 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 TRIM49CP0CI26 452 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 LAMP2P13473 410 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 TRIM21P19474 475 aaKnown RBP10.78□□□□□ -0.68
BRCA1-227ENST00000591849 WARSP23381 471 aaKnown RBP10.78□□□□□ -0.68
BRCA1-227ENST00000591849 GCLMP48507 274 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 ZXDAP98168 799 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 MTMR3Q13615 1198 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 MAPRE1Q15691 268 aaKnown RBP10.78□□□□□ -0.68
BRCA1-227ENST00000591849 CCDC40Q4G0X9 1142 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 ZCWPW2Q504Y3 356 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 DCAF17Q5H9S7 520 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-227ENST00000591849 INTS6LQ5JSJ4 861 aaKnown RBP10.78□□□□□ -0.68
BRCA1-227ENST00000591849 SCARA5Q6ZMJ2 495 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 C4orf50Q6ZRC1 276 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 LRRTM3Q86VH5 581 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 OSTM1Q86WC4 334 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 SCN4BQ8IWT1 228 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 LEMD2Q8NC56 503 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 ITFG1Q8TB96 612 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 GIPC2Q8TF65 315 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 NELFBQ8WX92 580 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 TAF4BQ92750 862 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 EDAQ92838 391 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 FGF13Q92913 245 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 MCRS1Q96EZ8 462 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 RTP3Q9BQQ7 232 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 SYT15Q9BQS2 421 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 PI4K2AQ9BTU6 479 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 SLITRK6Q9H5Y7 841 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 KIAA1468Q9P260 1216 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 IGSF9Q9P2J2 1179 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 EPS15L1Q9UBC2 864 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 HSFX1Q9UBD0 423 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 MAGEC2Q9UBF1 373 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-227ENST00000591849 GTF3C4Q9UKN8 822 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 CDH9Q9ULB4 789 aa10.78□□□□□ -0.68
BRCA1-227ENST00000591849 TRIM49BA6NDI0 452 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 FAM86C2PA6NEL3 165 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 GABRDO14764 452 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 SLC16A3O15427 465 aaKnown RBP10.77□□□□□ -0.69
BRCA1-227ENST00000591849 TACC1O75410 805 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 PAPLNO95428 1278 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 FGFR1OPO95684 399 aaKnown RBP10.77□□□□□ -0.69
BRCA1-227ENST00000591849 FGF19O95750 216 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 STAU1O95793 577 aaKnown RBP10.77□□□□□ -0.69
BRCA1-227ENST00000591849 HLA-DRAP01903 254 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 HAPLN1P10915 354 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-227ENST00000591849 GTF2H1P32780 548 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 STX17P56962 302 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 RPL10AP62906 217 aaKnown RBP10.77□□□□□ -0.69
BRCA1-227ENST00000591849 CLDN10P78369 228 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 CYP27A1Q02318 531 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 ENPEPQ07075 957 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 TDGQ13569 410 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 MORC3Q14149 939 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 TPD52L1Q16890 204 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-227ENST00000591849 ZACNQ401N2 412 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 WDR44Q5JSH3 913 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 MTSS1LQ765P7 747 aa10.77□□□□□ -0.69
BRCA1-227ENST00000591849 DNAJB7Q7Z6W7 309 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms