RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 LMO3Q8TAP4 145 aa17.15■□□□□ 0.34
PRKCSH-213ENST00000591510 FUCA2Q9BTY2 467 aa17.15■□□□□ 0.34
PRKCSH-213ENST00000591510 PRKD2Q9BZL6 878 aa17.15■□□□□ 0.34
PRKCSH-213ENST00000591510 DDX43Q9NXZ2 648 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-213ENST00000591510 CCDC195A0A1B0GUA6 201 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 FMO5P49326 533 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 NOP14P78316 857 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 ADCY1Q08828 1119 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 ZNF667Q5HYK9 610 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 FAM171BQ6P995 826 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 CYP26C1Q6V0L0 522 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 ATAD1Q8NBU5 361 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 CNOT6LQ96LI5 555 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 POMKQ9H5K3 350 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 THAP9Q9H5L6 903 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 CRTAC1Q9NQ79 661 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 HSFX1Q9UBD0 423 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 NXF1Q9UBU9 619 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 DACH1Q9UI36 760 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 R3HCC1Q9Y3T6 440 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 INSL5Q9Y5Q6 135 aa17.14■□□□□ 0.33
PRKCSH-213ENST00000591510 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 ACAT1P24752 427 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 RAP1GAPP47736 663 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 CDH8P55286 799 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 TNNC1P63316 161 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 ZP2Q05996 745 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 INCA1Q0VD86 236 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 CBX2Q14781 532 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 STX1AQ16623 288 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 SLC39A12Q504Y0 691 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 LIN9Q5TKA1 542 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 TCERG1LQ5VWI1 586 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 ELMSAN1Q6PJG2 1045 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 CCDC149Q6ZUS6 474 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 THEM5Q8N1Q8 247 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 ENOX1Q8TC92 643 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 PGLYRP2Q96PD5 576 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 MMS19Q96T76 1030 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 DNAJC25Q9H1X3 360 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 RAB20Q9NX57 234 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 HMGXB4Q9UGU5 601 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 YIPF1Q9Y548 306 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 TRIOO75962 3097 aa17.13■□□□□ 0.33
PRKCSH-213ENST00000591510 MYBPHLA2RUH7 354 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 CCL16O15467 120 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 ATP2C2O75185 946 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 FGFR1OPO95684 399 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 PCSK1P29120 753 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 MTHFRP42898 656 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 MYL7Q01449 175 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 TYRO3Q06418 890 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 PPM1LQ5SGD2 360 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 CDKAL1Q5VV42 579 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 SCARA5Q6ZMJ2 495 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 UBR7Q8N806 425 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 SMG7Q92540 1137 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 FAXDC2Q96IV6 333 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 NECTIN4Q96NY8 510 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 NECAB3Q96P71 396 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 SYT15Q9BQS2 421 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 NIF3L1Q9GZT8 377 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 HSD3B7Q9H2F3 369 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 DPEP3Q9H4B8 488 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 WDR6Q9NNW5 1121 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 ANO10Q9NW15 660 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 CDH9Q9ULB4 789 aa17.12■□□□□ 0.33
PRKCSH-213ENST00000591510 P4HA2O15460 535 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 N4BP1O75113 896 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 CCDC192P0DO97 292 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 PTMSP20962 102 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 PSMC1P62191 440 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 TSPY1Q01534 308 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 KCNH2Q12809 1159 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 SMARCB1Q12824 385 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 DUSP4Q13115 394 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 NCAPHQ15003 741 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 CES5AQ6NT32 575 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 ADHFE1Q8IWW8 467 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 ADAMTS19Q8TE59 1207 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 C2orf15Q8WU43 125 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 TATDN2Q93075 761 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 RIPOR3Q96MK2 946 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 LPIN3Q9BQK8 851 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 PHF7Q9BWX1 381 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 CYP3A43Q9HB55 503 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 CYP4F11Q9HBI6 524 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 ABCB6Q9NP58 842 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 CD320Q9NPF0 282 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 SAMSN1Q9NSI8 373 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 CEP72Q9P209 647 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 FAM50BQ9Y247 325 aa17.11■□□□□ 0.33
PRKCSH-213ENST00000591510 LOC730098B7Z3J9 87 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms