RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 VNN1O95497 513 aa23.98■■□□□ 1.43
MBD3-208ENST00000590830 CEBPBP17676 345 aa23.98■■□□□ 1.43
MBD3-208ENST00000590830 LMO2P25791 158 aa23.98■■□□□ 1.43
MBD3-208ENST00000590830 EPHA5P54756 1037 aa23.98■■□□□ 1.43
MBD3-208ENST00000590830 TMC2Q8TDI7 906 aa23.98■■□□□ 1.43
MBD3-208ENST00000590830 FGF14Q92915 247 aa23.98■■□□□ 1.43
MBD3-208ENST00000590830 SMARCE1Q969G3 411 aa23.98■■□□□ 1.43
MBD3-208ENST00000590830 ELMO3Q96BJ8 720 aa23.98■■□□□ 1.43
MBD3-208ENST00000590830 HSFX1Q9UBD0 423 aa23.98■■□□□ 1.43
MBD3-208ENST00000590830 NME7Q9Y5B8 376 aa23.98■■□□□ 1.43
MBD3-208ENST00000590830 COL9A1P20849 921 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 ALDH1A3P47895 512 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 ADAM9Q13443 819 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 COBLL1Q53SF7 1204 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 ISM2Q6H9L7 571 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 IQCEQ6IPM2 695 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 BMP8AQ7Z5Y6 402 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 TMC8Q8IU68 726 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 DCP1BQ8IZD4 617 aaKnown RBP23.97■■□□□ 1.43
MBD3-208ENST00000590830 ELMOD1Q8N336 334 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 SPATA18Q8TC71 538 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 MCRS1Q96EZ8 462 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 EEF2KMTQ96G04 330 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 MRPL45Q9BRJ2 306 aaKnown RBP23.97■■□□□ 1.43
MBD3-208ENST00000590830 FRMD4BQ9Y2L6 1034 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 NUMBLQ9Y6R0 609 aa23.97■■□□□ 1.43
MBD3-208ENST00000590830 MYBPHLA2RUH7 354 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 MAPK13O15264 365 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 KINO60870 393 aaKnown RBP23.96■■□□□ 1.43
MBD3-208ENST00000590830 ATP2C2O75185 946 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 STAU1O95793 577 aaKnown RBP23.96■■□□□ 1.43
MBD3-208ENST00000590830 HAPLN1P10915 354 aaPredicted RBP23.96■■□□□ 1.43
MBD3-208ENST00000590830 GJA1P17302 382 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 ATF6P18850 670 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 LHX1P48742 406 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 AP3M2P53677 418 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 EPHB3P54753 998 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 MYL7Q01449 175 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 TSPY1Q01534 308 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 TRPC3Q13507 836 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 INTS6LQ5JSJ4 861 aaKnown RBP23.96■■□□□ 1.43
MBD3-208ENST00000590830 PDZD4Q76G19 769 aaPredicted RBP23.96■■□□□ 1.43
MBD3-208ENST00000590830 DNAJB7Q7Z6W7 309 aaPredicted RBP23.96■■□□□ 1.43
MBD3-208ENST00000590830 SPPL2BQ8TCT7 592 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 C2orf15Q8WU43 125 aaKnown RBP23.96■■□□□ 1.43
MBD3-208ENST00000590830 NXPE3Q969Y0 559 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 SEPT5Q99719 369 aaPredicted RBP23.96■■□□□ 1.43
MBD3-208ENST00000590830 ZNF334Q9HCZ1 680 aaPredicted RBP23.96■■□□□ 1.43
MBD3-208ENST00000590830 ABI2Q9NYB9 513 aaPredicted RBP23.96■■□□□ 1.43
MBD3-208ENST00000590830 MAN1B1Q9UKM7 699 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 GTF3C4Q9UKN8 822 aa23.96■■□□□ 1.43
MBD3-208ENST00000590830 PHACTR2O75167 634 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 MICAL2O94851 1124 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 PDGFBP01127 241 aaPredicted RBP23.95■■□□□ 1.42
MBD3-208ENST00000590830 MYL4P12829 197 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 WARSP23381 471 aaKnown RBP23.95■■□□□ 1.42
MBD3-208ENST00000590830 ATICP31939 592 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 TUFMP49411 452 aaKnown RBP23.95■■□□□ 1.42
MBD3-208ENST00000590830 PMS1P54277 932 aaKnown RBP23.95■■□□□ 1.42
MBD3-208ENST00000590830 MCCD1P59942 119 aaPredicted RBP23.95■■□□□ 1.42
MBD3-208ENST00000590830 SMARCB1Q12824 385 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 PLD1Q13393 1074 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 BIRC3Q13489 604 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 EDRF1Q3B7T1 1238 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 WDR72Q3MJ13 1102 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 MGAT5BQ3V5L5 792 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 CYP4A22Q5TCH4 519 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 FAM171BQ6P995 826 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 SV2AQ7L0J3 742 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 ADSSL1Q8N142 457 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 PBXIP1Q96AQ6 731 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 ZSWIM3Q96MP5 696 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 MMS19Q96T76 1030 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 LPIN3Q9BQK8 851 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 PI4K2AQ9BTU6 479 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 HOOK1Q9UJC3 728 aaKnown RBP23.95■■□□□ 1.42
MBD3-208ENST00000590830 DUSP12Q9UNI6 340 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 PCDHB5Q9Y5E4 795 aa23.95■■□□□ 1.42
MBD3-208ENST00000590830 ZNF197O14709 1029 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 IKBKBO14920 756 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 PDGFRBP09619 1106 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 BMP6P22004 513 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 RPL13P26373 211 aaKnown RBP23.94■■□□□ 1.42
MBD3-208ENST00000590830 VAMP7P51809 220 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 NCOA4Q13772 614 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 ZACNQ401N2 412 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 ANKRD40Q6AI12 368 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 FAM186BQ8IYM0 893 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 SHKBP1Q8TBC3 707 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 GPR152Q8TDT2 470 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 PSMG2Q969U7 264 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 VRTNQ9H8Y1 702 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 CRTAC1Q9NQ79 661 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 ASAH2Q9NR71 780 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 GDE1Q9NZC3 331 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 NXF1Q9UBU9 619 aaKnown RBP23.94■■□□□ 1.42
MBD3-208ENST00000590830 ASB3Q9Y575 518 aa23.94■■□□□ 1.42
MBD3-208ENST00000590830 TACC1O75410 805 aa23.93■■□□□ 1.42
MBD3-208ENST00000590830 TRIM49P0CI25 452 aa23.93■■□□□ 1.42
MBD3-208ENST00000590830 TRIM49CP0CI26 452 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms