RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ATG2BQ96BY7 2078 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 LNP1A1A4G5 178 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 CAVIN2O95810 425 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 PRPHP41219 470 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 CDR1P51861 262 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 STRN3Q13033 797 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 RILPL1Q5EBL4 403 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 SH3PXD2AQ5TCZ1 1133 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 NAIF1Q69YI7 327 aaPredicted RBP18.79■□□□□ 0.6
RETREG3-210ENST00000590541 ARMCX5Q6P1M9 558 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 ZPBP2Q6X784 338 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 TMEM161BQ8NDZ6 487 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 OR10T2Q8NGX3 314 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 SNX29Q8TEQ0 813 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 SEPT5Q99719 369 aaPredicted RBP18.79■□□□□ 0.6
RETREG3-210ENST00000590541 ADAM33Q9BZ11 813 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 DNM3Q9UQ16 869 aa18.79■□□□□ 0.6
RETREG3-210ENST00000590541 CLDN3O15551 220 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 RHOBTB1O94844 696 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 CLTAP09496 248 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 TNFSF9P41273 254 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 GALK1P51570 392 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 ELF2Q15723 593 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 DAB2IPQ5VWQ8 1189 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 KCNK18Q7Z418 384 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 TMEM150AQ86TG1 271 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 IGSF22Q8N9C0 903 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 RIN3Q8TB24 985 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 SPIRE2Q8WWL2 714 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 GATA6Q92908 595 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 USP13Q92995 863 aaPredicted RBP18.78■□□□□ 0.6
RETREG3-210ENST00000590541 SENP8Q96LD8 212 aa18.78■□□□□ 0.6
RETREG3-210ENST00000590541 TSC2P49815 1807 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 LACTBL1A8MY62 500 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 H3BQV1 296 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 MAPTP10636 758 aaKnown RBP18.77■□□□□ 0.6
RETREG3-210ENST00000590541 ARSAP15289 507 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 DRD1P21728 446 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 GJB2P29033 226 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 TUFMP49411 452 aaKnown RBP18.77■□□□□ 0.6
RETREG3-210ENST00000590541 TOB1P50616 345 aaPredicted RBP18.77■□□□□ 0.6
RETREG3-210ENST00000590541 LILRA4P59901 499 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 NBR1Q14596 966 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 VEPH1Q14D04 833 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 ACAP1Q15027 740 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 KARSQ15046 597 aaKnown RBP18.77■□□□□ 0.6
RETREG3-210ENST00000590541 MGAT5BQ3V5L5 792 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 SLC39A12Q504Y0 691 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 MCTP1Q6DN14 999 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 SYT13Q7L8C5 426 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 KCTD17Q8N5Z5 321 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 RPLP0P6Q8NHW5 317 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 GIPC2Q8TF65 315 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 EZH1Q92800 747 aaPredicted RBP18.77■□□□□ 0.6
RETREG3-210ENST00000590541 GCNAQ96QF7 691 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 EBF1Q9UH73 591 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 SMC3Q9UQE7 1217 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 PCDHB6Q9Y5E3 794 aa18.77■□□□□ 0.6
RETREG3-210ENST00000590541 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.77■□□□□ 0.6
RETREG3-210ENST00000590541 TMEM8BA6NDV4 472 aa18.76■□□□□ 0.59
RETREG3-210ENST00000590541 PP2D1A8MPX8 630 aa18.76■□□□□ 0.59
RETREG3-210ENST00000590541 ODC1P11926 461 aa18.76■□□□□ 0.59
RETREG3-210ENST00000590541 NMT1P30419 496 aaKnown RBP18.76■□□□□ 0.59
RETREG3-210ENST00000590541 PPP2R3AQ06190 1150 aa18.76■□□□□ 0.59
RETREG3-210ENST00000590541 MAB21L3Q8N8X9 362 aa18.76■□□□□ 0.59
RETREG3-210ENST00000590541 P2RY13Q9BPV8 354 aa18.76■□□□□ 0.59
RETREG3-210ENST00000590541 SCNM1Q9BWG6 230 aa18.76■□□□□ 0.59
RETREG3-210ENST00000590541 ZCWPW1Q9H0M4 648 aa18.76■□□□□ 0.59
RETREG3-210ENST00000590541 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.76■□□□□ 0.59
RETREG3-210ENST00000590541 ZMYM5Q9UJ78 669 aa18.76■□□□□ 0.59
RETREG3-210ENST00000590541 TBX20Q9UMR3 447 aa18.76■□□□□ 0.59
RETREG3-210ENST00000590541 WDFY3Q8IZQ1 3526 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 SRRM3A6NNA2 597 aaPredicted RBP18.75■□□□□ 0.59
RETREG3-210ENST00000590541 CDX4O14627 284 aaPredicted RBP18.75■□□□□ 0.59
RETREG3-210ENST00000590541 FAM189A1O60320 539 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 CD2BP2O95400 341 aaKnown RBP18.75■□□□□ 0.59
RETREG3-210ENST00000590541 APBB3O95704 486 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 F11P03951 625 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 CYP11A1P05108 521 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 ADRB2P07550 413 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 CEACAM1P13688 526 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 PLS3P13797 630 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 CSRP1P21291 193 aaKnown RBP18.75■□□□□ 0.59
RETREG3-210ENST00000590541 GUCY2CP25092 1073 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 CDC25AP30304 524 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 GJA4P35212 333 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 AVPR1AP37288 418 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 MATR3P43243 847 aaKnown RBP eCLIP18.75■□□□□ 0.59
RETREG3-210ENST00000590541 AMPD2Q01433 879 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 RAD51AP2Q09MP3 1159 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 DMC1Q14565 340 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 ENOX2Q16206 610 aaKnown RBP18.75■□□□□ 0.59
RETREG3-210ENST00000590541 FBXO43Q4G163 708 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 SPATA1Q5VX52 437 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 KRT79Q5XKE5 535 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 DTHD1Q6ZMT9 781 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 TIPINQ9BVW5 301 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 TDP1Q9NUW8 608 aa18.75■□□□□ 0.59
RETREG3-210ENST00000590541 IGF2RP11717 2491 aa18.74■□□□□ 0.59
RETREG3-210ENST00000590541 XPOTO43592 962 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms