RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 KRBA2Q6ZNG9 492 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 CBWD2Q8IUF1 395 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 NELFCDQ8IXH7 590 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 C12orf56Q8IXR9 622 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 ZDHHC14Q8IZN3 488 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 ZNF461Q8TAF7 563 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 SMG7Q92540 1137 aaKnown RBP12.11□□□□□ -0.47
SMAD4-211ENST00000590499 BORCS6Q96GS4 357 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 FAM84AQ96KN4 292 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 C1QTNF1Q9BXJ1 281 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 PDE11AQ9HCR9 933 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 DPP3Q9NY33 737 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 ZNF318Q5VUA4 2279 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 CLUHO75153 1309 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 PTPRJQ12913 1337 aa12.11□□□□□ -0.47
SMAD4-211ENST00000590499 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 ARHGEF37A1IGU5 675 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 GPR37L1O60883 481 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 N4BP1O75113 896 aaKnown RBP12.1□□□□□ -0.47
SMAD4-211ENST00000590499 AP1G2O75843 785 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 ZNF202O95125 648 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 CYP11A1P05108 521 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 YWHAHQ04917 246 aaPredicted RBP12.1□□□□□ -0.47
SMAD4-211ENST00000590499 DPYDQ12882 1025 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 PSMD2Q13200 908 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 UVSSAQ2YD98 709 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 CTXN3Q4LDR2 81 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 SCARA3Q6AZY7 606 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 RTL10Q7L3V2 364 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 FMR1NBQ8N0W7 255 aaPredicted RBP12.1□□□□□ -0.47
SMAD4-211ENST00000590499 C1orf127Q8N9H9 656 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 TDRD5Q8NAT2 981 aaKnown RBP12.1□□□□□ -0.47
SMAD4-211ENST00000590499 SLC7A14Q8TBB6 771 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 SENP8Q96LD8 212 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 C1QTNF2Q9BXJ5 285 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 EXOC1Q9NV70 894 aa12.1□□□□□ -0.47
SMAD4-211ENST00000590499 TIMM13Q9Y5L4 95 aaPredicted RBP12.1□□□□□ -0.47
SMAD4-211ENST00000590499 ZNF233A6NK53 670 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 CLIC2O15247 247 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 SEC24AO95486 1093 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 VNN2O95498 520 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 RPN1P04843 607 aaKnown RBP12.09□□□□□ -0.47
SMAD4-211ENST00000590499 ATF2P15336 505 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 TAF6P49848 677 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 TFAMQ00059 246 aaKnown RBP12.09□□□□□ -0.47
SMAD4-211ENST00000590499 PTPN21Q16825 1174 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 KNOP1Q1ED39 458 aaKnown RBP12.09□□□□□ -0.47
SMAD4-211ENST00000590499 PPM1LQ5SGD2 360 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 TPGS2Q68CL5 300 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 DSTYKQ6XUX3 929 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 HS2ST1Q7LGA3 356 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 OTOP3Q7RTS5 596 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 TCEAL8Q8IYN2 117 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 ENGASEQ8NFI3 743 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 TMEM174Q8WUU8 243 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 OXCT2Q9BYC2 517 aaPredicted RBP12.09□□□□□ -0.47
SMAD4-211ENST00000590499 GZF1Q9H116 711 aaPredicted RBP12.09□□□□□ -0.47
SMAD4-211ENST00000590499 KCTD10Q9H3F6 313 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 KIAA1586Q9HCI6 787 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 CGNQ9P2M7 1197 aaKnown RBP12.09□□□□□ -0.47
SMAD4-211ENST00000590499 AFF4Q9UHB7 1163 aaKnown RBP12.09□□□□□ -0.47
SMAD4-211ENST00000590499 SIX4Q9UIU6 781 aa12.09□□□□□ -0.47
SMAD4-211ENST00000590499 FAM86C2PA6NEL3 165 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 OR6C75A6NL08 312 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 CCL16O15467 120 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 ITGB3P05106 788 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 ODC1P11926 461 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 POLR2BP30876 1174 aaKnown RBP12.08□□□□□ -0.48
SMAD4-211ENST00000590499 PNPLA4P41247 253 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 CYP2J2P51589 502 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 CYP24A1Q07973 514 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 SNW1Q13573 536 aaKnown RBP12.08□□□□□ -0.48
SMAD4-211ENST00000590499 NR6A1Q15406 480 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 SNRNP35Q16560 246 aaKnown RBP12.08□□□□□ -0.48
SMAD4-211ENST00000590499 OVOS1Q6IE37 1185 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 LRRC52Q8N7C0 313 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 XXYLT1Q8NBI6 393 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 OR5B17Q8NGF7 314 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 OR10T2Q8NGX3 314 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 NOC3LQ8WTT2 800 aaKnown RBP12.08□□□□□ -0.48
SMAD4-211ENST00000590499 CACTINQ8WUQ7 758 aaKnown RBP12.08□□□□□ -0.48
SMAD4-211ENST00000590499 EDAQ92838 391 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 ZNF560Q96MR9 790 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 RTP3Q9BQQ7 232 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 LRFN3Q9BTN0 628 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 MTMR12Q9C0I1 747 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 INTS13Q9NVM9 706 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 DMAC2Q9NW81 257 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 EPS15L1Q9UBC2 864 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 ITGA11Q9UKX5 1188 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 MAFFQ9ULX9 164 aa12.08□□□□□ -0.48
SMAD4-211ENST00000590499 MUC6Q6W4X9 2439 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 KPNA7A9QM74 516 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 CYB561D2O14569 222 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 MAN1A2O60476 641 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 XYLBO75191 536 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 OR4Q2P0C623 313 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 ARPP19P56211 112 aa12.07□□□□□ -0.48
SMAD4-211ENST00000590499 NTHL1P78549 312 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms