RNA–Protein interactions for RNA: ENST00000589737.5

POLR2E-206, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-206ENST00000589737 USP24Q9UPU5 2620 aa16.32■□□□□ 0.2
POLR2E-206ENST00000589737 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.32■□□□□ 0.2
POLR2E-206ENST00000589737 HOXC13P31276 330 aa16.32■□□□□ 0.2
POLR2E-206ENST00000589737 TUFMP49411 452 aaKnown RBP16.32■□□□□ 0.2
POLR2E-206ENST00000589737 GTF2BQ00403 316 aa16.32■□□□□ 0.2
POLR2E-206ENST00000589737 MCM6Q14566 821 aa16.32■□□□□ 0.2
POLR2E-206ENST00000589737 HEATR6Q6AI08 1181 aaKnown RBP16.32■□□□□ 0.2
POLR2E-206ENST00000589737 WDR5BQ86VZ2 330 aa16.32■□□□□ 0.2
POLR2E-206ENST00000589737 C2orf15Q8WU43 125 aaKnown RBP16.32■□□□□ 0.2
POLR2E-206ENST00000589737 CALML4Q96GE6 196 aa16.32■□□□□ 0.2
POLR2E-206ENST00000589737 GCNAQ96QF7 691 aa16.32■□□□□ 0.2
POLR2E-206ENST00000589737 CCSER1Q9C0I3 900 aa16.32■□□□□ 0.2
POLR2E-206ENST00000589737 ASB7Q9H672 318 aa16.32■□□□□ 0.2
POLR2E-206ENST00000589737 TISP43B9A030 160 aa16.31■□□□□ 0.2
POLR2E-206ENST00000589737 PLCG1P19174 1290 aa16.31■□□□□ 0.2
POLR2E-206ENST00000589737 NMT1P30419 496 aaKnown RBP16.31■□□□□ 0.2
POLR2E-206ENST00000589737 ABCD1P33897 745 aa16.31■□□□□ 0.2
POLR2E-206ENST00000589737 ACOT2P49753 483 aa16.31■□□□□ 0.2
POLR2E-206ENST00000589737 DHX8Q14562 1220 aaKnown RBP16.31■□□□□ 0.2
POLR2E-206ENST00000589737 ITPRIPL2Q3MIP1 535 aa16.31■□□□□ 0.2
POLR2E-206ENST00000589737 FAM160A2Q8N612 972 aaPredicted RBP16.31■□□□□ 0.2
POLR2E-206ENST00000589737 SPPL2BQ8TCT7 592 aa16.31■□□□□ 0.2
POLR2E-206ENST00000589737 RAD54LQ92698 747 aa16.31■□□□□ 0.2
POLR2E-206ENST00000589737 PYM1Q9BRP8 204 aaKnown RBP16.31■□□□□ 0.2
POLR2E-206ENST00000589737 SLC46A2Q9BY10 475 aa16.31■□□□□ 0.2
POLR2E-206ENST00000589737 SMG9Q9H0W8 520 aaKnown RBP16.31■□□□□ 0.2
POLR2E-206ENST00000589737 ZMYM5Q9UJ78 669 aa16.31■□□□□ 0.2
POLR2E-206ENST00000589737 STYXL1Q9Y6J8 313 aa16.31■□□□□ 0.2
POLR2E-206ENST00000589737 ANKRD63C9JTQ0 380 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 CYB561D2O14569 222 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 TBCAO75347 108 aaKnown RBP16.3■□□□□ 0.2
POLR2E-206ENST00000589737 HAPLN1P10915 354 aaPredicted RBP16.3■□□□□ 0.2
POLR2E-206ENST00000589737 GJB2P29033 226 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 UBA7P41226 1012 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 TAF6P49848 677 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 CDR1P51861 262 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 SMARCB1Q12824 385 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 KARSQ15046 597 aaKnown RBP16.3■□□□□ 0.2
POLR2E-206ENST00000589737 RABEP1Q15276 862 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 C8orf34Q49A92 452 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 PPM1JQ5JR12 505 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 PKN3Q6P5Z2 889 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 TMEM150AQ86TG1 271 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 LRRTM3Q86VH5 581 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 METTL23Q86XA0 190 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 EFCAB13Q8IY85 973 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 CHFRQ96EP1 664 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 FAM83CQ9BQN1 747 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 ST6GALNAC4Q9H4F1 302 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 HPS4Q9NQG7 708 aa16.3■□□□□ 0.2
POLR2E-206ENST00000589737 ABI2Q9NYB9 513 aaPredicted RBP16.3■□□□□ 0.2
POLR2E-206ENST00000589737 H3BQV1 296 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 EXTL3O43909 919 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 GDF9O60383 454 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 FOXD2O60548 495 aaPredicted RBP16.29■□□□□ 0.2
POLR2E-206ENST00000589737 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
POLR2E-206ENST00000589737 GRIN1Q05586 938 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 ZC2HC1CQ53FD0 456 aaPredicted RBP16.29■□□□□ 0.2
POLR2E-206ENST00000589737 WSCD1Q658N2 575 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 ADALQ6DHV7 355 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 FSTL4Q6MZW2 842 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 CEP68Q76N32 757 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 CMTM8Q8IZV2 173 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 GIPC2Q8TF65 315 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 LARP4BQ92615 738 aaKnown RBP16.29■□□□□ 0.2
POLR2E-206ENST00000589737 TMX3Q96JJ7 454 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 ZHX3Q9H4I2 956 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 THG1LQ9NWX6 298 aaKnown RBP16.29■□□□□ 0.2
POLR2E-206ENST00000589737 DPP3Q9NY33 737 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
POLR2E-206ENST00000589737 CCL26Q9Y258 94 aa16.29■□□□□ 0.2
POLR2E-206ENST00000589737 CCDC163A0A0D9SF12 145 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 PPP1R37O75864 691 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 KRT37O76014 449 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 KRT18P05783 430 aaKnown RBP16.28■□□□□ 0.2
POLR2E-206ENST00000589737 HMGA1P17096 107 aaKnown RBP16.28■□□□□ 0.2
POLR2E-206ENST00000589737 DDX6P26196 483 aaKnown RBP eCLIP16.28■□□□□ 0.25e-9■■■■□ 19.9
POLR2E-206ENST00000589737 LONP1P36776 959 aaKnown RBP16.28■□□□□ 0.2
POLR2E-206ENST00000589737 NLRP12P59046 1061 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 TMEM196Q5HYL7 178 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 SLFN12LQ6IEE8 588 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 CRELD2Q6UXH1 353 aaPredicted RBP16.28■□□□□ 0.2
POLR2E-206ENST00000589737 THEM5Q8N1Q8 247 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 RIN3Q8TB24 985 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 GAB3Q8WWW8 586 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 USP13Q92995 863 aaPredicted RBP16.28■□□□□ 0.2
POLR2E-206ENST00000589737 ZNF560Q96MR9 790 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 IKZF4Q9H2S9 585 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 KIF9Q9HAQ2 790 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 GKN1Q9NS71 199 aa16.28■□□□□ 0.2
POLR2E-206ENST00000589737 THADAQ6YHU6 1953 aa16.27■□□□□ 0.2
POLR2E-206ENST00000589737 ABCA7Q8IZY2 2146 aa16.27■□□□□ 0.2
POLR2E-206ENST00000589737 OTOL1A6NHN0 477 aaPredicted RBP16.27■□□□□ 0.2
POLR2E-206ENST00000589737 TRDMT1O14717 391 aaKnown RBP16.27■□□□□ 0.2
POLR2E-206ENST00000589737 CD2BP2O95400 341 aaKnown RBP16.27■□□□□ 0.2
POLR2E-206ENST00000589737 BMP15O95972 392 aa16.27■□□□□ 0.2
POLR2E-206ENST00000589737 F11P03951 625 aa16.27■□□□□ 0.2
POLR2E-206ENST00000589737 AVPR1AP37288 418 aa16.27■□□□□ 0.2
POLR2E-206ENST00000589737 LIMK1P53667 647 aa16.27■□□□□ 0.2
POLR2E-206ENST00000589737 RUNX3Q13761 415 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms