RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 GNL1P36915 607 aaPredicted RBP20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 KCNMA1Q12791 1236 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 KCNC3Q14003 757 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 CCDC142Q17RM4 750 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 PHLDB3Q6NSJ2 640 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 PPFIBP1Q86W92 1011 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 EFHBQ8N7U6 833 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 KAT5Q92993 513 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 ACBD6Q9BR61 282 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 ZCWPW1Q9H0M4 648 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 STXBP5LQ9Y2K9 1186 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 A8MXQ7 604 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 SPATA31D3P0C874 917 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 PCSK1P29120 753 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 PSMC1P62191 440 aaKnown RBP20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 INCA1Q0VD86 236 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 SLC39A12Q504Y0 691 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 INTS6LQ5JSJ4 861 aaKnown RBP20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 FKBP15Q5T1M5 1219 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 GJB7Q6PEY0 223 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 LILRA6Q6PI73 481 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 SPATA31D4Q6ZUB0 917 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 RRAGAQ7L523 313 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 GAS2L3Q86XJ1 694 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 SYT15Q9BQS2 421 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 DPEP3Q9H4B8 488 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 SIX2Q9NPC8 291 aa20.27■□□□□ 0.83
CLPTM1-209ENST00000588855 ATP2C2O75185 946 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 SERPINC1P01008 464 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 TBXAS1P24557 533 aaPredicted RBP20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 CDR1P51861 262 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 FANCCQ00597 558 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 TSPY1Q01534 308 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 UBXN1Q04323 297 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 ORC1Q13415 861 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 RNF19BQ6ZMZ0 732 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 LRRTM3Q86VH5 581 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 PGLYRP2Q96PD5 576 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 TWNKQ96RR1 684 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 PKMYT1Q99640 499 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 CISHQ9NSE2 258 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 TMLHEQ9NVH6 421 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 CLDND1Q9NY35 253 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 APEX2Q9UBZ4 518 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 FBXW11Q9UKB1 542 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 CDH9Q9ULB4 789 aa20.26■□□□□ 0.83
CLPTM1-209ENST00000588855 PTPRDP23468 1912 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 FSD2A1L4K1 749 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 TEX33O43247 280 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 ABLIM3O94929 683 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 VNN2O95498 520 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 KLK7P49862 253 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 NDST1P52848 882 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 GPR17Q13304 367 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 COL19A1Q14993 1142 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 CTC1Q2NKJ3 1217 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 DPY19L2P1Q6NXN4 242 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 UBR7Q8N806 425 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 MAFAQ8NHW3 353 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 ZNF461Q8TAF7 563 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 KREMEN1Q96MU8 473 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 NAP1L5Q96NT1 182 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 LPIN3Q9BQK8 851 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 LSM14BQ9BX40 385 aaKnown RBP20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 RBSNQ9H1K0 784 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 CRTAC1Q9NQ79 661 aa20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 RTN4Q9NQC3 1192 aaKnown RBP20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 BARX2Q9UMQ3 279 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-209ENST00000588855 A0A1B0GTH6 734 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 CILPO75339 1184 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 GCNT1Q02742 428 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 ADAM15Q13444 863 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 SKIV2LQ15477 1246 aaKnown RBP20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 PTPN21Q16825 1174 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 TPGS2Q68CL5 300 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 EP400NLQ6ZTU2 488 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 UNC93AQ86WB7 457 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 DCP1BQ8IZD4 617 aaKnown RBP20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 KREMEN2Q8NCW0 462 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 WHAMMQ8TF30 809 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 UBE2TQ9NPD8 197 aaPredicted RBP20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 MAN1C1Q9NR34 630 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 AFF4Q9UHB7 1163 aaKnown RBP20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 AJAP1Q9UKB5 411 aaPredicted RBP20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 GTF3C4Q9UKN8 822 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 SIK3Q9Y2K2 1263 aa20.24■□□□□ 0.83
CLPTM1-209ENST00000588855 MYBPHLA2RUH7 354 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 MTMR11A4FU01 709 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 TBX10O75333 385 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 ATF2P15336 505 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 ADCY1Q08828 1119 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 SYCP1Q15431 976 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 FILIP1LQ4L180 1135 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 ZNF394Q53GI3 561 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 B3GALNT2Q8NCR0 500 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 CASP10Q92851 521 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 PABPC5Q96DU9 382 aaKnown RBP20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 ANP32EQ9BTT0 268 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 ELOVL4Q9GZR5 314 aa20.23■□□□□ 0.83
CLPTM1-209ENST00000588855 NCK2O43639 380 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms