RNA–Protein interactions for RNA: ENST00000588622.1

PDCD5-206, Transcript of programmed cell death 5, humanhuman

TSL 2

Gene PDCD5, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-206ENST00000588622 PDHA1P08559 390 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 U2AF1L5P0DN76 240 aaPredicted RBP4.25□□□□□ -1.73
PDCD5-206ENST00000588622 SRGNP10124 158 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 ARFIP2P53365 341 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 U2AF1Q01081 240 aaKnown RBP eCLIP4.25□□□□□ -1.73
PDCD5-206ENST00000588622 SP2Q02086 613 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 HLXQ14774 488 aaPredicted RBP4.25□□□□□ -1.73
PDCD5-206ENST00000588622 ZNF169Q14929 603 aaPredicted RBP4.25□□□□□ -1.73
PDCD5-206ENST00000588622 LLGL1Q15334 1064 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 PREPLQ4J6C6 727 aaPredicted RBP4.25□□□□□ -1.73
PDCD5-206ENST00000588622 CYB5RLQ6IPT4 315 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 MICALCLQ6ZW33 695 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 KIAA0319LQ8IZA0 1049 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 FAM109AQ8N4B1 249 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 SNX19Q92543 992 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 DDX17Q92841 729 aaKnown RBP4.25□□□□□ -1.73
PDCD5-206ENST00000588622 PDLIM2Q96JY6 352 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 C22orf23Q9BZE7 217 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 SIK2Q9H0K1 926 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 SERHLQ9NQF3 203 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 HESX1Q9UBX0 185 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 DMTF1Q9Y222 760 aa4.25□□□□□ -1.73
PDCD5-206ENST00000588622 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 VSTM5A8MXK1 200 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 ADM5C9JUS6 153 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 KIAA0355O15063 1070 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 YY2O15391 372 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 SUV39H1O43463 412 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 CTNND1O60716 968 aaKnown RBP4.24□□□□□ -1.73
PDCD5-206ENST00000588622 KITP10721 976 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 PCSK6P29122 969 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 NDUFV1P49821 464 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 MAPK10P53779 464 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 INHBEP58166 350 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 FGL2Q14314 439 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 GRM3Q14832 879 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 ANO6Q4KMQ2 910 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 PRR16Q569H4 304 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 RBM20Q5T481 1227 aaKnown RBP4.24□□□□□ -1.73
PDCD5-206ENST00000588622 FAM160B1Q5W0V3 765 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 DAAM2Q86T65 1068 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 FAM98AQ8NCA5 519 aaKnown RBP4.24□□□□□ -1.73
PDCD5-206ENST00000588622 SIMC1Q8NDZ2 872 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 IL31RAQ8NI17 732 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 TFAP2BQ92481 460 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 MAML1Q92585 1016 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 SLC46A1Q96NT5 459 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 TRIM54Q9BYV2 358 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 TTYH3Q9C0H2 523 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 TMEM60Q9H2L4 133 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 R3HDMLQ9H3Y0 253 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 SARS2Q9NP81 518 aaKnown RBP4.24□□□□□ -1.73
PDCD5-206ENST00000588622 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.24□□□□□ -1.73
PDCD5-206ENST00000588622 C11orf21Q9P2W6 132 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 TCEAL9Q9UHQ7 104 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 MED16Q9Y2X0 877 aa4.24□□□□□ -1.73
PDCD5-206ENST00000588622 USP19O94966 1318 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 SPATA31A3Q5VYP0 1347 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 ADGRA2Q96PE1 1338 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 A0A0B4J269 797 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 TMEM233B4DJY2 109 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 PPM1GO15355 546 aaPredicted RBP4.23□□□□□ -1.73
PDCD5-206ENST00000588622 PEX1O43933 1283 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 C1QL1O75973 258 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 CHRM2P08172 466 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 BMP5P22003 454 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 FOLR3P41439 243 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 GCLCP48506 637 aaPredicted RBP4.23□□□□□ -1.73
PDCD5-206ENST00000588622 UCP3P55916 312 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 MRPS35P82673 323 aaKnown RBP4.23□□□□□ -1.73
PDCD5-206ENST00000588622 TUBB3Q13509 450 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 TXNRD1Q16881 649 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 MINDY4Q4G0A6 757 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 APOA5Q6Q788 366 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 PEG10Q86TG7 708 aaKnown RBP4.23□□□□□ -1.73
PDCD5-206ENST00000588622 MYO1HQ8N1T3 1032 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.23□□□□□ -1.73
PDCD5-206ENST00000588622 TTC8Q8TAM2 541 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 ACTRT2Q8TDY3 377 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 SLC9A6Q92581 669 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 SPATA5L1Q9BVQ7 753 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 DPH1Q9BZG8 443 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 AMBRA1Q9C0C7 1298 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 SMURF2Q9HAU4 748 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 STK32BQ9NY57 414 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 DKK3Q9UBP4 350 aa4.23□□□□□ -1.73
PDCD5-206ENST00000588622 POLR2AP24928 1970 aaKnown RBP4.23□□□□□ -1.73
PDCD5-206ENST00000588622 F5H697 171 aa4.22□□□□□ -1.73
PDCD5-206ENST00000588622 MYO1FO00160 1098 aa4.22□□□□□ -1.73
PDCD5-206ENST00000588622 TBX3O15119 743 aa4.22□□□□□ -1.73
PDCD5-206ENST00000588622 SOAT2O75908 522 aa4.22□□□□□ -1.73
PDCD5-206ENST00000588622 GRPP07492 148 aa4.22□□□□□ -1.73
PDCD5-206ENST00000588622 CXCR5P32302 372 aa4.22□□□□□ -1.73
PDCD5-206ENST00000588622 KCNJ5P48544 419 aa4.22□□□□□ -1.73
PDCD5-206ENST00000588622 SLC11A2P49281 568 aa4.22□□□□□ -1.73
PDCD5-206ENST00000588622 LILRA4P59901 499 aa4.22□□□□□ -1.73
PDCD5-206ENST00000588622 CNN3Q15417 329 aaKnown RBP4.22□□□□□ -1.73
PDCD5-206ENST00000588622 SMN1Q16637 294 aaKnown RBP4.22□□□□□ -1.73
PDCD5-206ENST00000588622 ZIK1Q3SY52 487 aaPredicted RBP4.22□□□□□ -1.73
PDCD5-206ENST00000588622 ARHGAP29Q52LW3 1261 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms