RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 TNK2Q07912 1038 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 SRSF5Q13243 272 aaKnown RBP15.2■□□□□ 0.02
DNMT1-213ENST00000587604 MCM6Q14566 821 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 PTPAQ15257 358 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 TAF12Q16514 161 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 ITPRIPL2Q3MIP1 535 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 HEATR6Q6AI08 1181 aaKnown RBP15.2■□□□□ 0.02
DNMT1-213ENST00000587604 ADALQ6DHV7 355 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 SLFN12LQ6IEE8 588 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 PRR23CQ6ZRP0 262 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.2■□□□□ 0.02
DNMT1-213ENST00000587604 THEM5Q8N1Q8 247 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 LRRC15Q8TF66 581 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 SLC46A2Q9BY10 475 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 ZHX3Q9H4I2 956 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 C2orf42Q9NWW7 574 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 STYXL1Q9Y6J8 313 aa15.2■□□□□ 0.02
DNMT1-213ENST00000587604 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.19■□□□□ 0.02
DNMT1-213ENST00000587604 ANKRD63C9JTQ0 380 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 TBCAO75347 108 aaKnown RBP15.19■□□□□ 0.02
DNMT1-213ENST00000587604 GJB2P29033 226 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 NMT1P30419 496 aaKnown RBP15.19■□□□□ 0.02
DNMT1-213ENST00000587604 MCM2P49736 904 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 TAF6P49848 677 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 CYP4F8P98187 520 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 RABEP1Q15276 862 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 LRRTM3Q86VH5 581 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 WDR5BQ86VZ2 330 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 SPPL2BQ8TCT7 592 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 RAD54LQ92698 747 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 TMX3Q96JJ7 454 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 PYM1Q9BRP8 204 aaKnown RBP15.19■□□□□ 0.02
DNMT1-213ENST00000587604 CCSER1Q9C0I3 900 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 ST6GALNAC4Q9H4F1 302 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 DPP3Q9NY33 737 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 GREB1Q4ZG55 1949 aa15.19■□□□□ 0.02
DNMT1-213ENST00000587604 BMP15O95972 392 aa15.18■□□□□ 0.02
DNMT1-213ENST00000587604 ADRB1P08588 477 aa15.18■□□□□ 0.02
DNMT1-213ENST00000587604 HAPLN1P10915 354 aaPredicted RBP15.18■□□□□ 0.02
DNMT1-213ENST00000587604 PLCG1P19174 1290 aa15.18■□□□□ 0.02
DNMT1-213ENST00000587604 LONP1P36776 959 aaKnown RBP15.18■□□□□ 0.02
DNMT1-213ENST00000587604 KARSQ15046 597 aaKnown RBP15.18■□□□□ 0.02
DNMT1-213ENST00000587604 ZC2HC1CQ53FD0 456 aaPredicted RBP15.18■□□□□ 0.02
DNMT1-213ENST00000587604 WSCD1Q658N2 575 aa15.18■□□□□ 0.02
DNMT1-213ENST00000587604 CEP68Q76N32 757 aa15.18■□□□□ 0.02
DNMT1-213ENST00000587604 CMTM8Q8IZV2 173 aa15.18■□□□□ 0.02
DNMT1-213ENST00000587604 FAM160A2Q8N612 972 aaPredicted RBP15.18■□□□□ 0.02
DNMT1-213ENST00000587604 RASSF8Q8NHQ8 419 aa15.18■□□□□ 0.02
DNMT1-213ENST00000587604 GIPC2Q8TF65 315 aa15.18■□□□□ 0.02
DNMT1-213ENST00000587604 FAM83CQ9BQN1 747 aa15.18■□□□□ 0.02
DNMT1-213ENST00000587604 SMG9Q9H0W8 520 aaKnown RBP15.18■□□□□ 0.02
DNMT1-213ENST00000587604 GKN1Q9NS71 199 aa15.18■□□□□ 0.02
DNMT1-213ENST00000587604 AGO2Q9UKV8 859 aaKnown RBP15.18■□□□□ 0.02
DNMT1-213ENST00000587604 SOBPA7XYQ1 873 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 KPNA7A9QM74 516 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 TISP43B9A030 160 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 DDX6P26196 483 aaKnown RBP eCLIP15.17■□□□□ 0.02
DNMT1-213ENST00000587604 DDIT3P35638 169 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 AVPR1AP37288 418 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 CDR1P51861 262 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 C8orf34Q49A92 452 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 PPM1JQ5JR12 505 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 ZNF720Q7Z2F6 126 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 TMEM150AQ86TG1 271 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 NT5DC4Q86YG4 428 aa15.17■□□□□ 0.02
DNMT1-213ENST00000587604 DCP1BQ8IZD4 617 aaKnown RBP15.17■□□□□ 0.02
DNMT1-213ENST00000587604 LARP4BQ92615 738 aaKnown RBP15.17■□□□□ 0.02
DNMT1-213ENST00000587604 ABI2Q9NYB9 513 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-213ENST00000587604 CCDC163A0A0D9SF12 145 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 EXTL3O43909 919 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 GDF9O60383 454 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 ATG13O75143 517 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 F11P03951 625 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 HMGA1P17096 107 aaKnown RBP15.16■□□□□ 0.02
DNMT1-213ENST00000587604 HOXC13P31276 330 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 NLRP12P59046 1061 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 AMPD2Q01433 879 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 GRIN1Q05586 938 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 GRSF1Q12849 480 aaKnown RBP eCLIP15.16■□□□□ 0.02
DNMT1-213ENST00000587604 RUNX3Q13761 415 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 POSTNQ15063 836 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 SV2CQ496J9 727 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 TMEM196Q5HYL7 178 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 CRELD2Q6UXH1 353 aaPredicted RBP15.16■□□□□ 0.02
DNMT1-213ENST00000587604 EFCAB13Q8IY85 973 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 MAB21L3Q8N8X9 362 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 KRI1Q8N9T8 703 aaKnown RBP15.16■□□□□ 0.02
DNMT1-213ENST00000587604 USP13Q92995 863 aaPredicted RBP15.16■□□□□ 0.02
DNMT1-213ENST00000587604 LOXL4Q96JB6 756 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 PCDHB5Q9Y5E4 795 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 OBSL1O75147 1896 aa15.16■□□□□ 0.02
DNMT1-213ENST00000587604 OTOL1A6NHN0 477 aaPredicted RBP15.15■□□□□ 0.02
DNMT1-213ENST00000587604 TRDMT1O14717 391 aaKnown RBP15.15■□□□□ 0.02
DNMT1-213ENST00000587604 IL18RAPO95256 599 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 ADSSP30520 456 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 PNPLA4P41247 253 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 BFSP1Q12934 665 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 NFE2Q16621 373 aaPredicted RBP15.15■□□□□ 0.02
DNMT1-213ENST00000587604 LARP1BQ659C4 914 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms