RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 FZD9O00144 591 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 GABRDO14764 452 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 YY2O15391 372 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 IGLV2-14P01704 120 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 SRGNP10124 158 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 FOLR3P41439 243 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 CDKN1CP49918 316 aaPredicted RBP5.5□□□□□ -1.53
VMP1-205ENST00000587470 RPS7P62081 194 aaKnown RBP5.5□□□□□ -1.53
VMP1-205ENST00000587470 KIF23Q02241 960 aaPredicted RBP5.5□□□□□ -1.53
VMP1-205ENST00000587470 TLE1Q04724 770 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 PCBP2Q15366 365 aaKnown RBP eCLIP5.5□□□□□ -1.53
VMP1-205ENST00000587470 SF3B3Q15393 1217 aaKnown RBP5.5□□□□□ -1.53
VMP1-205ENST00000587470 KIAA0895LQ68EN5 471 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 AOPEPQ8N6M6 819 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 MTMR8Q96EF0 704 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 DMRTA2Q96SC8 542 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 HEPHQ9BQS7 1158 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 MAN1C1Q9NR34 630 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 RRP7BPQ9NSQ0 103 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 SEMA4GQ9NTN9 838 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 INTS13Q9NVM9 706 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 CDYLQ9Y232 598 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 PHLPP1O60346 1717 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 MAST1Q9Y2H9 1570 aa5.5□□□□□ -1.53
VMP1-205ENST00000587470 AFF2P51816 1311 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 LRP5O75197 1615 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 LRP6O75581 1613 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 ALG1L2C9J202 215 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 KIF3BO15066 747 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 ANXA1P04083 346 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 CD1AP06126 327 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 AMPD3Q01432 767 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 DYRK1AQ13627 763 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 VWA1Q6PCB0 445 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 ZNF365Q70YC5 407 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 PNMA8AQ86V59 439 aaPredicted RBP5.49□□□□□ -1.53
VMP1-205ENST00000587470 PRPF38AQ8NAV1 312 aaKnown RBP5.49□□□□□ -1.53
VMP1-205ENST00000587470 KLHL32Q96NJ5 620 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 SPATA5L1Q9BVQ7 753 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 VSX1Q9NZR4 365 aaPredicted RBP5.49□□□□□ -1.53
VMP1-205ENST00000587470 CTTNBP2NLQ9P2B4 639 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 SLC17A6Q9P2U8 582 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 CFAP20Q9Y6A4 193 aaKnown RBP5.49□□□□□ -1.53
VMP1-205ENST00000587470 PLXNC1O60486 1568 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 UGGT1Q9NYU2 1555 aa5.49□□□□□ -1.53
VMP1-205ENST00000587470 RGS12O14924 1447 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 ADGRL2O95490 1459 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 NLRP1Q9C000 1473 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 ROCK1Q13464 1354 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 KIF15Q9NS87 1388 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 MGST3O14880 152 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 MPPED1O15442 326 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 PROM1O43490 865 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 KATNA1O75449 491 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 C1RP00736 705 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 GATA3P23771 443 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 IL12RB1P42701 662 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 ADKP55263 362 aaKnown RBP5.48□□□□□ -1.53
VMP1-205ENST00000587470 PIGFQ07326 219 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 FLYWCH1Q4VC44 716 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 TTC7BQ86TV6 843 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 CFAP52Q8N1V2 620 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 KAT5Q92993 513 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 TMEM125Q96AQ2 219 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 IMPG2Q9BZV3 1241 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 SLC13A1Q9BZW2 595 aa5.48□□□□□ -1.53
VMP1-205ENST00000587470 XIRP1Q702N8 1843 aaKnown RBP5.48□□□□□ -1.53
VMP1-205ENST00000587470 TMEM94Q12767 1356 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 ANKRD30AQ9BXX3 1397 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 CCDC195A0A1B0GUA6 201 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 CCDC151A5D8V7 595 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 ORC4O43929 436 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 SUN1O94901 812 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 ZNF37AP17032 561 aaPredicted RBP5.47□□□□□ -1.53
VMP1-205ENST00000587470 ANXA11P50995 505 aaKnown RBP5.47□□□□□ -1.53
VMP1-205ENST00000587470 POU6F2P78424 691 aaPredicted RBP5.47□□□□□ -1.53
VMP1-205ENST00000587470 NHLH1Q02575 133 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 PTPN21Q16825 1174 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 NBPF8Q3BBV2 869 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 UAP1L1Q3KQV9 507 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 CD300EQ496F6 205 aaPredicted RBP5.47□□□□□ -1.53
VMP1-205ENST00000587470 COLEC12Q5KU26 742 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 LRCH2Q5VUJ6 765 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 KAZNQ674X7 775 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 ARHGEF25Q86VW2 580 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 PDSS2Q86YH6 399 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 SLC17A8Q8NDX2 589 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 NSUN6Q8TEA1 469 aaKnown RBP5.47□□□□□ -1.53
VMP1-205ENST00000587470 SIDT1Q9NXL6 827 aaKnown RBP5.47□□□□□ -1.53
VMP1-205ENST00000587470 SLC45A2Q9UMX9 530 aa5.47□□□□□ -1.53
VMP1-205ENST00000587470 E7ENX8 843 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 PROP1O75360 226 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 CCND1P24385 295 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 CYP2C19P33261 490 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 TAP2Q03519 686 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 HLXQ14774 488 aaPredicted RBP5.46□□□□□ -1.54
VMP1-205ENST00000587470 KHDC1Q4VXA5 237 aaKnown RBP5.46□□□□□ -1.54
VMP1-205ENST00000587470 MICALCLQ6ZW33 695 aa5.46□□□□□ -1.54
VMP1-205ENST00000587470 GRASPQ7Z6J2 395 aaPredicted RBP5.46□□□□□ -1.54
VMP1-205ENST00000587470 FAM177A1Q8N128 213 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms