RNA–Protein interactions for RNA: ENST00000586518.1

H3F3B-203, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 1,701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-203ENST00000586518 RPAINQ86UA6 219 aa31.58■■■□□ 2.65
H3F3B-203ENST00000586518 C18orf8Q96DM3 657 aa31.58■■■□□ 2.65
H3F3B-203ENST00000586518 WDR3Q9UNX4 943 aaKnown RBP eCLIP31.58■■■□□ 2.65
H3F3B-203ENST00000586518 IPPQ9Y573 584 aa31.58■■■□□ 2.65
H3F3B-203ENST00000586518 SNX9Q9Y5X1 595 aa31.58■■■□□ 2.65
H3F3B-203ENST00000586518 SMIM28A0A1B0GU29 152 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 FAM187AA6NFU0 413 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 PHF2O75151 1096 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 MYBL2P10244 700 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 PRKAR2AP13861 404 aaKnown RBP31.57■■■□□ 2.64
H3F3B-203ENST00000586518 PIGHQ14442 188 aaPredicted RBP31.57■■■□□ 2.64
H3F3B-203ENST00000586518 C9orf57Q5W0N0 161 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 GDF6Q6KF10 455 aaPredicted RBP31.57■■■□□ 2.64
H3F3B-203ENST00000586518 LLGL2Q6P1M3 1020 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 FAM228AQ86W67 206 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 CAVIN3Q969G5 261 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 HINFPQ9BQA5 517 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 TUBGCP4Q9UGJ1 667 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 AMACRQ9UHK6 382 aa31.57■■■□□ 2.64
H3F3B-203ENST00000586518 GTF3C5Q9Y5Q8 519 aaPredicted RBP31.57■■■□□ 2.64
H3F3B-203ENST00000586518 CST5P28325 142 aaPredicted RBP31.56■■■□□ 2.64
H3F3B-203ENST00000586518 SSR1P43307 286 aaKnown RBP31.56■■■□□ 2.64
H3F3B-203ENST00000586518 SND1Q7KZF4 910 aaKnown RBP eCLIP31.56■■■□□ 2.646e-27■□□□□ 9.2
H3F3B-203ENST00000586518 SERINC5Q86VE9 423 aa31.56■■■□□ 2.64
H3F3B-203ENST00000586518 UNC93AQ86WB7 457 aa31.56■■■□□ 2.64
H3F3B-203ENST00000586518 TWNKQ96RR1 684 aa31.56■■■□□ 2.64
H3F3B-203ENST00000586518 CFHR5Q9BXR6 569 aa31.56■■■□□ 2.64
H3F3B-203ENST00000586518 TRIM7Q9C029 511 aa31.56■■■□□ 2.64
H3F3B-203ENST00000586518 SCN10AQ9Y5Y9 1956 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 M0QYV0 167 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 MICAL2O94851 1124 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 ASGR1P07306 291 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 DR1Q01658 176 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 ZNF268Q14587 947 aaPredicted RBP31.55■■■□□ 2.64
H3F3B-203ENST00000586518 HSP90B2PQ58FF3 399 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 ADAT2Q7Z6V5 191 aaKnown RBP31.55■■■□□ 2.64
H3F3B-203ENST00000586518 GSPT2Q8IYD1 628 aaKnown RBP31.55■■■□□ 2.64
H3F3B-203ENST00000586518 IPO4Q8TEX9 1081 aaKnown RBP31.55■■■□□ 2.64
H3F3B-203ENST00000586518 FAM114A2Q9NRY5 505 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 GSCP56915 257 aaPredicted RBP31.55■■■□□ 2.64
H3F3B-203ENST00000586518 TRIM32Q13049 653 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 KCNA10Q16322 511 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 GLRA4Q5JXX5 417 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 KLHDC9Q8NEP7 349 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 CASKIN2Q8WXE0 1202 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 C18orf25Q96B23 403 aaPredicted RBP31.55■■■□□ 2.64
H3F3B-203ENST00000586518 MCEEQ96PE7 176 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 SRRDQ9UH36 339 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 USTQ9Y2C2 406 aa31.55■■■□□ 2.64
H3F3B-203ENST00000586518 GPR182O15218 404 aa31.54■■■□□ 2.64
H3F3B-203ENST00000586518 CABYRO75952 493 aa31.54■■■□□ 2.64
H3F3B-203ENST00000586518 MYCNP04198 464 aaPredicted RBP31.54■■■□□ 2.64
H3F3B-203ENST00000586518 SNX16P57768 344 aa31.54■■■□□ 2.64
H3F3B-203ENST00000586518 FBXO47Q5MNV8 452 aa31.54■■■□□ 2.64
H3F3B-203ENST00000586518 LCLAT1Q6UWP7 414 aa31.54■■■□□ 2.64
H3F3B-203ENST00000586518 MAGOHBQ96A72 148 aaKnown RBP31.54■■■□□ 2.64
H3F3B-203ENST00000586518 RNF186Q9NXI6 227 aa31.54■■■□□ 2.64
H3F3B-203ENST00000586518 HMGXB4Q9UGU5 601 aa31.54■■■□□ 2.64
H3F3B-203ENST00000586518 TCRBV5S1A1TA0A578 114 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 SIGLEC16A6NMB1 481 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 O00370 1275 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 FSCN2O14926 492 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 CCND3P30281 292 aaPredicted RBP31.53■■■□□ 2.64
H3F3B-203ENST00000586518 CARSP49589 748 aaKnown RBP31.53■■■□□ 2.64
H3F3B-203ENST00000586518 PSMC1P62191 440 aaKnown RBP31.53■■■□□ 2.64
H3F3B-203ENST00000586518 ORC1Q13415 861 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 SV2CQ496J9 727 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 RNF180Q86T96 592 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 CPNE8Q86YQ8 564 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 KATNAL2Q8IYT4 538 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 TMEM130Q8N3G9 435 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 KLK14Q9P0G3 267 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 NFU1Q9UMS0 254 aa31.53■■■□□ 2.64
H3F3B-203ENST00000586518 PIRO00625 290 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 KRT3P12035 628 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 HLTFQ14527 1009 aaKnown RBP eCLIP31.52■■■□□ 2.64
H3F3B-203ENST00000586518 ODF2Q5BJF6 829 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 AADACL2Q6P093 401 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 CREBZFQ9NS37 354 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 ST3GAL5Q9UNP4 418 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 GNRH1P01148 92 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 TAF6P49848 677 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 PTPN20Q4JDL3 420 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 PPP1R15BQ5SWA1 713 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 LRRC38Q5VT99 294 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 DPH6Q7L8W6 267 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 SMG8Q8ND04 991 aaKnown RBP31.52■■■□□ 2.64
H3F3B-203ENST00000586518 EXD1Q8NHP7 514 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 DDX27Q96GQ7 796 aaKnown RBP31.52■■■□□ 2.64
H3F3B-203ENST00000586518 SENP6Q9GZR1 1112 aaPredicted RBP31.52■■■□□ 2.64
H3F3B-203ENST00000586518 PLEKHA4Q9H4M7 779 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 HOMER3Q9NSC5 361 aa31.52■■■□□ 2.64
H3F3B-203ENST00000586518 PODXLO00592 558 aa31.51■■■□□ 2.63
H3F3B-203ENST00000586518 TTI1O43156 1089 aa31.51■■■□□ 2.63
H3F3B-203ENST00000586518 ELNP15502 786 aa31.51■■■□□ 2.63
H3F3B-203ENST00000586518 GABRB2P47870 512 aa31.51■■■□□ 2.63
H3F3B-203ENST00000586518 RPL7AP62424 266 aaKnown RBP31.51■■■□□ 2.63
H3F3B-203ENST00000586518 NFX1Q12986 1120 aaKnown RBP31.51■■■□□ 2.63
H3F3B-203ENST00000586518 CYP1B1Q16678 543 aa31.51■■■□□ 2.63
H3F3B-203ENST00000586518 CYP4A22Q5TCH4 519 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms