RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 SHBGP04278 402 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 ATP5OP48047 213 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 KRT17Q04695 432 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 PAK2Q13177 524 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 KYNUQ16719 465 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 CLEC16AQ2KHT3 1053 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 TMEM35BQ8NCS4 154 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 ELOVL4Q9GZR5 314 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 MAP3K20Q9NYL2 800 aaKnown RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 SIX4Q9UIU6 781 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 MTUS1Q9ULD2 1270 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 SOAT2O75908 522 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 HOXC6P09630 235 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 NEFHP12036 1026 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 NDUFV1P49821 464 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 IRX4P78413 519 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 OGDHQ02218 1023 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 GAD2Q05329 585 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 NNTQ13423 1086 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 ZNF792Q3KQV3 632 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 DUSP28Q4G0W2 176 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 NME8Q8N427 588 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 LRRC57Q8N9N7 239 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 DYDC1Q8WWB3 177 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 LBHD1Q9BQE6 289 aaPredicted RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 STRA6Q9BX79 667 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 SNX25Q9H3E2 840 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 SEMA4AQ9H3S1 761 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 VPS37BQ9H9H4 285 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 SLC5A4Q9NY91 659 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 PCDHGC5Q9Y5F6 944 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 MYO18AQ92614 2054 aaKnown RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 CAPN9O14815 690 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 ATP2A1O14983 1001 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 TSPAN1O60635 241 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 PQBP1O60828 265 aaKnown RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 EIF4BP23588 611 aaKnown RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 GNGT1P63211 74 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 TARBP2Q15633 366 aaKnown RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 SGSM1Q2NKQ1 1148 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 PPP1R26Q5T8A7 1209 aaPredicted RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 IL31Q6EBC2 164 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 JAMLQ86YT9 394 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 CCNYQ8ND76 341 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 GDAP1Q8TB36 358 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 DEPDC1BQ8WUY9 529 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 TRIM56Q9BRZ2 755 aaKnown RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 EDEM3Q9BZQ6 932 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 ACBD3Q9H3P7 528 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 DHX35Q9H5Z1 703 aaKnown RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 SPC25Q9HBM1 224 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 XPNPEP3Q9NQH7 507 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 HESX1Q9UBX0 185 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 CYTH4Q9UIA0 394 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 PNMA2Q9UL42 364 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 HPCAL4Q9UM19 191 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 PSEN2P49810 448 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 CDH6P55285 790 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 KRT81Q14533 505 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 SLC9A9Q8IVB4 645 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 PAF1Q8N7H5 531 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 SLC2A14Q8TDB8 520 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 TRIB2Q92519 343 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 AGAP3Q96P47 875 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 NTPCRQ9BSD7 190 aaKnown RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 MAK16Q9BXY0 300 aaKnown RBP10.87□□□□□ -0.67
RFFL-212ENST00000584655 PDLIM7Q9NR12 457 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 RNF186Q9NXI6 227 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 SNX10Q9Y5X0 201 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 CNTNAP2Q9UHC6 1331 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 H0YCG3 227 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 TRIM66O15016 1216 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 CDK17Q00537 523 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 ZC3H12AQ5D1E8 599 aaKnown RBP10.86□□□□□ -0.67
RFFL-212ENST00000584655 RNF187Q5TA31 235 aaPredicted RBP10.86□□□□□ -0.67
RFFL-212ENST00000584655 WSCD1Q658N2 575 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 CASC4Q6P4E1 433 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 ABRAQ8N0Z2 381 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 RDM1Q8NG50 284 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 FMO2Q99518 471 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 PRMT7Q9NVM4 692 aaPredicted RBP10.86□□□□□ -0.67
RFFL-212ENST00000584655 CDY2AQ9Y6F7 541 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 ZNF831Q5JPB2 1677 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 CST8O60676 142 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 SLC4A1P02730 911 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 ASGR1P07306 291 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 FECHP22830 423 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 MAP3K7CLP57077 242 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 GPS1Q13098 491 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 DCAF6Q58WW2 860 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 RHOT2Q8IXI1 618 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 PRELID2Q8N945 189 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 ARRDC4Q8NCT1 418 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.86□□□□□ -0.67
RFFL-212ENST00000584655 SYN2Q92777 582 aaPredicted RBP10.86□□□□□ -0.67
RFFL-212ENST00000584655 ATXN7L3BQ96GX2 97 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 GINM1Q9NU53 330 aa10.86□□□□□ -0.67
RFFL-212ENST00000584655 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFFL-212ENST00000584655 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms