RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CYP27B1O15528 508 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 OCM2P0CE71 109 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 OCMP0CE72 109 aaPredicted RBP13.6□□□□□ -0.23
RNF43-208ENST00000584437 RPS6P62753 249 aaKnown RBP13.6□□□□□ -0.23
RNF43-208ENST00000584437 MROH9Q5TGP6 573 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 BNC2Q6ZN30 1099 aaPredicted RBP13.6□□□□□ -0.23
RNF43-208ENST00000584437 SH3KBP1Q96B97 665 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 VPS50Q96JG6 964 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 PLA2G12BQ9BX93 195 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 CTDNEP1O95476 244 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 DLGAP3O95886 979 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 AKR1B1P15121 316 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 CACNB3P54284 484 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 ANTXR2P58335 489 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 OVGP1Q12889 678 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 THEMIS2Q5TEJ8 643 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 APBB2Q92870 758 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 ZFYVE19Q96K21 471 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 GPR101Q96P66 508 aaPredicted RBP13.6□□□□□ -0.23
RNF43-208ENST00000584437 DIABLOQ9NR28 239 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 RAB21Q9UL25 225 aa13.6□□□□□ -0.23
RNF43-208ENST00000584437 UBOX5O94941 541 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 FDFT1P37268 417 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 ACAD10Q6JQN1 1059 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 KCNV1Q6PIU1 500 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 BBS2Q9BXC9 721 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 JPH1Q9HDC5 661 aaPredicted RBP13.59□□□□□ -0.23
RNF43-208ENST00000584437 SLC24A2Q9UI40 661 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 FARP1Q9Y4F1 1045 aaPredicted RBP13.59□□□□□ -0.23
RNF43-208ENST00000584437 SAC3D1A6NKF1 404 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 EEF2KO00418 725 aaKnown RBP13.59□□□□□ -0.23
RNF43-208ENST00000584437 RALBP11234 206 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 ACADSBP45954 432 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.59□□□□□ -0.23
RNF43-208ENST00000584437 MEI1Q5TIA1 1274 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 NAPEPLDQ6IQ20 393 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 CNPY3Q9BT09 278 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 BRD8Q9H0E9 1235 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 SRP68Q9UHB9 627 aaKnown RBP13.59□□□□□ -0.23
RNF43-208ENST00000584437 PNPLA6Q8IY17 1366 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 NRKQ7Z2Y5 1582 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 A0A0A6YYK5 440 aaPredicted RBP13.59□□□□□ -0.23
RNF43-208ENST00000584437 GPD1P21695 349 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 RPA1P27694 616 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 FAM83EQ2M2I3 478 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 LDHDQ86WU2 507 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 DDX50Q9BQ39 737 aaKnown RBP13.59□□□□□ -0.23
RNF43-208ENST00000584437 MTMR4Q9NYA4 1195 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 FAM153AQ9UHL3 310 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 CDC42BPGQ6DT37 1551 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 HLA-DRAP01903 254 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 CCDC126Q96EE4 140 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 DCUN1D1Q96GG9 259 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 CNOT7Q9UIV1 285 aaKnown RBP13.59□□□□□ -0.23
RNF43-208ENST00000584437 AGAP1Q9UPQ3 857 aa13.59□□□□□ -0.23
RNF43-208ENST00000584437 A0A087X0T9 212 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 SYNDIG1LA6NDD5 238 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 SPDYE5A6NIY4 337 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 FAM228BP0C875 321 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 SPDYE7PQ495Y7 208 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 RAB42Q8N4Z0 105 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 RNF149Q8NC42 400 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 VPS37AQ8NEZ2 397 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 URGCPQ8TCY9 931 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 OTULINQ96BN8 352 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 FAM84BQ96KN1 310 aaPredicted RBP13.58□□□□□ -0.23
RNF43-208ENST00000584437 ANKZF1Q9H8Y5 726 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 H2AFY2Q9P0M6 372 aaPredicted RBP13.58□□□□□ -0.23
RNF43-208ENST00000584437 TJP2Q9UDY2 1190 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 LRCH1Q9Y2L9 728 aa13.58□□□□□ -0.23
RNF43-208ENST00000584437 SLCO1B7G3V0H7 640 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 TM9SF1O15321 606 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 PRPF4O43172 522 aaKnown RBP eCLIP13.58□□□□□ -0.243e-6■■□□□ 12
RNF43-208ENST00000584437 KIZQ2M2Z5 673 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 BOLA3Q53S33 107 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 IZUMO2Q6UXV1 221 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 CATSPER2Q96P56 530 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 TDRD3Q9H7E2 651 aaKnown RBP13.58□□□□□ -0.24
RNF43-208ENST00000584437 NARFQ9UHQ1 456 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 LRRC7Q96NW7 1537 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 TMEM94Q12767 1356 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 PBRM1Q86U86 1689 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 SUPT3HB4E1H0 165 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 MYL3P08590 195 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 RGS4P49798 205 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 CACNA2D1P54289 1103 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 GPSM2P81274 684 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 R3HDM1Q15032 1099 aaKnown RBP13.58□□□□□ -0.24
RNF43-208ENST00000584437 EFHC1Q5JVL4 640 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 LINC00523Q86TU6 105 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 GANCQ8TET4 914 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 CASP10Q92851 521 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 ZNF669Q96BR6 464 aaPredicted RBP13.58□□□□□ -0.24
RNF43-208ENST00000584437 NSUN4Q96CB9 384 aaKnown RBP13.58□□□□□ -0.24
RNF43-208ENST00000584437 AGBL1Q96MI9 1066 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 FUCA2Q9BTY2 467 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 THAP2Q9H0W7 228 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 CAPN6Q9Y6Q1 641 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 PLA2R1Q13018 1463 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 TRPM1Q7Z4N2 1603 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms