RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 RAB34Q9BZG1 259 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 IL21Q9HBE4 155 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 FBRSL1Q9HCM7 1045 aaKnown RBP13.34□□□□□ -0.27
TOP3A-215ENST00000583328 ZMYM5Q9UJ78 669 aa13.34□□□□□ -0.27
TOP3A-215ENST00000583328 GREB1Q4ZG55 1949 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 TMEM8BA6NDV4 472 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 OTOL1A6NHN0 477 aaPredicted RBP13.33□□□□□ -0.28
TOP3A-215ENST00000583328 KHNYNO15037 678 aaKnown RBP13.33□□□□□ -0.28
TOP3A-215ENST00000583328 APBB3O95704 486 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 ARSAP15289 507 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 DGKEP52429 567 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 LILRA4P59901 499 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 GNL2Q13823 731 aaKnown RBP13.33□□□□□ -0.28
TOP3A-215ENST00000583328 ACAP1Q15027 740 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 KRT79Q5XKE5 535 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 C4orf32Q8N8J7 132 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 MAB21L3Q8N8X9 362 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 TMEM161BQ8NDZ6 487 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 RPLP0P6Q8NHW5 317 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 FAM212AQ96EL1 285 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 BICD1Q96G01 975 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 C8orf76Q96K31 380 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 P2RY13Q9BPV8 354 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 TIPINQ9BVW5 301 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 RPF1Q9H9Y2 349 aaKnown RBP13.33□□□□□ -0.28
TOP3A-215ENST00000583328 CCL26Q9Y258 94 aa13.33□□□□□ -0.28
TOP3A-215ENST00000583328 CEP295Q9C0D2 2601 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 PPEF2O14830 753 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 TOP3BO95985 862 aaKnown RBP13.32□□□□□ -0.28
TOP3A-215ENST00000583328 MAPTP10636 758 aaKnown RBP13.32□□□□□ -0.28
TOP3A-215ENST00000583328 CEACAM1P13688 526 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 PLS3P13797 630 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 ATF6P18850 670 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 PAX3P23760 479 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 U2AF2P26368 475 aaKnown RBP eCLIP13.32□□□□□ -0.28
TOP3A-215ENST00000583328 TNFSF9P41273 254 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 RAD51AP2Q09MP3 1159 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 PSMD2Q13200 908 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 DMC1Q14565 340 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 KYAT1Q16773 422 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 SYT13Q7L8C5 426 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 METTL23Q86XA0 190 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 THEM5Q8N1Q8 247 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 OR10T2Q8NGX3 314 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 USP13Q92995 863 aaPredicted RBP13.32□□□□□ -0.28
TOP3A-215ENST00000583328 ACDQ96AP0 544 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 CHFRQ96EP1 664 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 SCNM1Q9BWG6 230 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 HAPLN2Q9GZV7 340 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 FOXP1Q9H334 677 aaPredicted RBP13.32□□□□□ -0.28
TOP3A-215ENST00000583328 KIF9Q9HAQ2 790 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 TMEM9BQ9NQ34 198 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 TDP1Q9NUW8 608 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 EBF1Q9UH73 591 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 NOL7Q9UMY1 257 aaKnown RBP13.32□□□□□ -0.28
TOP3A-215ENST00000583328 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
TOP3A-215ENST00000583328 SPAG17Q6Q759 2223 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 LNP1A1A4G5 178 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 CSRP1P21291 193 aaKnown RBP13.31□□□□□ -0.28
TOP3A-215ENST00000583328 GUCY2CP25092 1073 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 DDX6P26196 483 aaKnown RBP eCLIP13.31□□□□□ -0.28
TOP3A-215ENST00000583328 GJA4P35212 333 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 SMARCB1Q12824 385 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 NBR1Q14596 966 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 PDGFRLQ15198 375 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 ZRSR1Q15695 479 aaKnown RBP13.31□□□□□ -0.28
TOP3A-215ENST00000583328 UAP1L1Q3KQV9 507 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 USP39Q53GS9 565 aaKnown RBP13.31□□□□□ -0.28
TOP3A-215ENST00000583328 SPATA1Q5VX52 437 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 TXNDC8Q6A555 127 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 C11orf74Q86VG3 221 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 IGSF22Q8N9C0 903 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 MRPS31Q92665 395 aaKnown RBP13.31□□□□□ -0.28
TOP3A-215ENST00000583328 TSPAN18Q96SJ8 248 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
TOP3A-215ENST00000583328 ZCWPW1Q9H0M4 648 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 DSEQ9UL01 958 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 WASF3Q9UPY6 502 aa13.31□□□□□ -0.28
TOP3A-215ENST00000583328 PDCD11Q14690 1871 aaKnown RBP13.3□□□□□ -0.28
TOP3A-215ENST00000583328 SRRM3A6NNA2 597 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-215ENST00000583328 PP2D1A8MPX8 630 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 F11P03951 625 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 CYP11A1P05108 521 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 HAPLN1P10915 354 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-215ENST00000583328 CDC25AP30304 524 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 NMT1P30419 496 aaKnown RBP13.3□□□□□ -0.28
TOP3A-215ENST00000583328 TRAPPC10P48553 1259 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 LIG4P49917 911 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 NLRP12P59046 1061 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 ENOX2Q16206 610 aaKnown RBP13.3□□□□□ -0.28
TOP3A-215ENST00000583328 C9orf57Q5W0N0 161 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 NAIF1Q69YI7 327 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-215ENST00000583328 JADE1Q6IE81 842 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 KCNK18Q7Z418 384 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 CYP2U1Q7Z449 544 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 TMEM150AQ86TG1 271 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 CPA6Q8N4T0 437 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 TTC16Q8NEE8 873 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 TSTD1Q8NFU3 115 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 SPPL2BQ8TCT7 592 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms