RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 KYAT1Q16773 422 aa17.49■□□□□ 0.39
SREBF1-221ENST00000583080 IL31Q6EBC2 164 aa17.49■□□□□ 0.39
SREBF1-221ENST00000583080 TMEM150AQ86TG1 271 aa17.49■□□□□ 0.39
SREBF1-221ENST00000583080 LRRTM3Q86VH5 581 aa17.49■□□□□ 0.39
SREBF1-221ENST00000583080 STKLD1Q8NE28 680 aa17.49■□□□□ 0.39
SREBF1-221ENST00000583080 CDK5RAP3Q96JB5 506 aa17.49■□□□□ 0.39
SREBF1-221ENST00000583080 CHAMP1Q96JM3 812 aa17.49■□□□□ 0.39
SREBF1-221ENST00000583080 ZSCAN31Q96LW9 406 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-221ENST00000583080 GCNAQ96QF7 691 aa17.49■□□□□ 0.39
SREBF1-221ENST00000583080 FAM83CQ9BQN1 747 aa17.49■□□□□ 0.39
SREBF1-221ENST00000583080 GKN1Q9NS71 199 aa17.49■□□□□ 0.39
SREBF1-221ENST00000583080 ATG2BQ96BY7 2078 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 ANO9A1A5B4 782 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 TISP43B9A030 160 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 FOXD2O60548 495 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-221ENST00000583080 PMLP29590 882 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 RAP1GAPP47736 663 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 TUFMP49411 452 aaKnown RBP17.48■□□□□ 0.39
SREBF1-221ENST00000583080 TMEM196Q5HYL7 178 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 N4BP2L1Q5TBK1 243 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-221ENST00000583080 NAIF1Q69YI7 327 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-221ENST00000583080 GPBP1Q86WP2 473 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 CMTM8Q8IZV2 173 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 C12orf50Q8NA57 414 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-221ENST00000583080 KIF2CQ99661 725 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 EBF3Q9H4W6 596 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 ODF2LQ9ULJ1 636 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 DENND4CQ5VZ89 1909 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 CFAP47Q6ZTR5 3102 aa17.48■□□□□ 0.39
SREBF1-221ENST00000583080 TCHHQ07283 1943 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 TM4SF5O14894 197 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 EGFP01133 1207 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 ZNF806P0C7X5 589 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 ARSAP15289 507 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 GPR15P49685 360 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 ACOT2P49753 483 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 ZNF131P52739 623 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 RUNX3Q13761 415 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 DHX8Q14562 1220 aaKnown RBP17.47■□□□□ 0.39
SREBF1-221ENST00000583080 WSCD1Q658N2 575 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 MCTP1Q6DN14 999 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 CACNA2D4Q7Z3S7 1137 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 MYCT1Q8N699 235 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 MAB21L3Q8N8X9 362 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 DDX1Q92499 740 aaKnown RBP17.47■□□□□ 0.39
SREBF1-221ENST00000583080 USP13Q92995 863 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-221ENST00000583080 TSPAN18Q96SJ8 248 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 FIZ1Q96SL8 496 aa17.47■□□□□ 0.39
SREBF1-221ENST00000583080 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
SREBF1-221ENST00000583080 THG1LQ9NWX6 298 aaKnown RBP17.47■□□□□ 0.39
SREBF1-221ENST00000583080 ABI2Q9NYB9 513 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-221ENST00000583080 ANKRD63C9JTQ0 380 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 CYB561D2O14569 222 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 RNF40O75150 1001 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 FAM13AO94988 1023 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 CCDC192P0DO97 292 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 HAPLN1P10915 354 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-221ENST00000583080 HMGA1P17096 107 aaKnown RBP17.46■□□□□ 0.39
SREBF1-221ENST00000583080 NLRP12P59046 1061 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 GRSF1Q12849 480 aaKnown RBP eCLIP17.46■□□□□ 0.39
SREBF1-221ENST00000583080 TAF12Q16514 161 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 RILPL1Q5EBL4 403 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 TCEAL6Q6IPX3 200 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 CD302Q8IX05 232 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 KCTD17Q8N5Z5 321 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 TCEAL3Q969E4 200 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 LOXL4Q96JB6 756 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 HHIPQ96QV1 700 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 IKZF4Q9H2S9 585 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 PARVGQ9HBI0 331 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 FBRSL1Q9HCM7 1045 aaKnown RBP17.46■□□□□ 0.39
SREBF1-221ENST00000583080 BLOC1S4Q9NUP1 217 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 TMLHEQ9NVH6 421 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 ANGPTL2Q9UKU9 493 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 DSEQ9UL01 958 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 SLC8A2Q9UPR5 921 aa17.46■□□□□ 0.39
SREBF1-221ENST00000583080 CHD6Q8TD26 2715 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 CCDC163A0A0D9SF12 145 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 TRDMT1O14717 391 aaKnown RBP17.45■□□□□ 0.38
SREBF1-221ENST00000583080 TRAK2O60296 914 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 F11P03951 625 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 AVPR1AP37288 418 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 MPLP40238 635 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 TAF6P49848 677 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 PLA2G2CQ5R387 149 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 STPG1Q5TH74 334 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 SDHAF4Q5VUM1 108 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 TXNDC8Q6A555 127 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 METTL23Q86XA0 190 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 EFCAB13Q8IY85 973 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 SPPL2BQ8TCT7 592 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 DERAQ9Y315 318 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 C2CD2Q9Y426 696 aa17.45■□□□□ 0.38
SREBF1-221ENST00000583080 KIAA1549LQ6ZVL6 1849 aa17.44■□□□□ 0.38
SREBF1-221ENST00000583080 ZNF638Q14966 1978 aaKnown RBP17.44■□□□□ 0.38
SREBF1-221ENST00000583080 CEP295Q9C0D2 2601 aa17.44■□□□□ 0.38
SREBF1-221ENST00000583080 TADA3O75528 432 aa17.44■□□□□ 0.38
SREBF1-221ENST00000583080 PAX3P23760 479 aa17.44■□□□□ 0.38
SREBF1-221ENST00000583080 BFSP1Q12934 665 aa17.44■□□□□ 0.38
SREBF1-221ENST00000583080 MCM6Q14566 821 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms