RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 SNX25Q9H3E2 840 aa11.17□□□□□ -0.62
TOP3A-212ENST00000582122 PIDD1Q9HB75 910 aa11.17□□□□□ -0.62
TOP3A-212ENST00000582122 ABCB6Q9NP58 842 aa11.17□□□□□ -0.62
TOP3A-212ENST00000582122 ANO10Q9NW15 660 aa11.17□□□□□ -0.62
TOP3A-212ENST00000582122 DDX43Q9NXZ2 648 aaKnown RBP11.17□□□□□ -0.62
TOP3A-212ENST00000582122 CDH9Q9ULB4 789 aa11.17□□□□□ -0.62
TOP3A-212ENST00000582122 L1RE1Q9UN81 338 aa11.17□□□□□ -0.62
TOP3A-212ENST00000582122 ASB3Q9Y575 518 aa11.17□□□□□ -0.62
TOP3A-212ENST00000582122 TIMM13Q9Y5L4 95 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-212ENST00000582122 MTCL1Q9Y4B5 1905 aaKnown RBP11.17□□□□□ -0.62
TOP3A-212ENST00000582122 WDR27A2RRH5 827 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 TRIM49BA6NDI0 452 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 ADAM12O43184 909 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 ASS1P00966 412 aaKnown RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 CST3P01034 146 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 HLA-DRAP01903 254 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 ALDH1A3P47895 512 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 GCLMP48507 274 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 PMS1P54277 932 aaKnown RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 ARPP19P56211 112 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 MYL6P60660 151 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 DLG4P78352 724 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 ADCY1Q08828 1119 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 SOWAHAQ2M3V2 549 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 DCAF17Q5H9S7 520 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 IQCEQ6IPM2 695 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 TMC5Q6UXY8 1006 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 C4orf50Q6ZRC1 276 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 OTOP3Q7RTS5 596 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 ITIH5Q86UX2 942 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 SLC7A14Q8TBB6 771 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 PLEKHO2Q8TD55 490 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 SMG7Q92540 1137 aaKnown RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 ACSF2Q96CM8 615 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 FUBP3Q96I24 572 aaKnown RBP eCLIP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 TNIP3Q96KP6 325 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 CEP295NLQ96MC4 621 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 DUSP9Q99956 384 aaKnown RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 SRRTQ9BXP5 876 aaKnown RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 NAT10Q9H0A0 1025 aaKnown RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 THAP9Q9H5L6 903 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 CYP3A43Q9HB55 503 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 CYP4F11Q9HBI6 524 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 MAGEC2Q9UBF1 373 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 COQ4Q9Y3A0 265 aa11.16□□□□□ -0.62
TOP3A-212ENST00000582122 ZFP37Q9Y6Q3 630 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-212ENST00000582122 ZNF197O14709 1029 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 FGF19O95750 216 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 GNL1P36915 607 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 EPHB3P54753 998 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 STX17P56962 302 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 YWHAEP62258 255 aaKnown RBP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 RBM10P98175 930 aaKnown RBP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 VEPH1Q14D04 833 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 CLUL1Q15846 466 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 STX1AQ16623 288 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 KLHL40Q2TBA0 621 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 INTS6LQ5JSJ4 861 aaKnown RBP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 C1orf220Q5T0J3 134 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 RSPO2Q6UXX9 243 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 UNC93AQ86WB7 457 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 FAM81BQ96LP2 452 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 ZNF512Q96ME7 567 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 WDR6Q9NNW5 1121 aaKnown RBP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 CD320Q9NPF0 282 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 AVENQ9NQS1 362 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 RAB20Q9NX57 234 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 PCDHB5Q9Y5E4 795 aa11.15□□□□□ -0.62
TOP3A-212ENST00000582122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.15□□□□□ -0.62
TOP3A-212ENST00000582122 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 DCXO43602 365 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 MICAL2O94851 1124 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 VNN1O95497 513 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 TPM2P07951 284 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 SPATA31D3P0C874 917 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 TRIM49P0CI25 452 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 TRIM49CP0CI26 452 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 IL9P15248 144 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 PTPN2P17706 415 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 TBXAS1P24557 533 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-212ENST00000582122 RPL10AP62906 217 aaKnown RBP11.14□□□□□ -0.63
TOP3A-212ENST00000582122 NOP14P78316 857 aaKnown RBP11.14□□□□□ -0.63
TOP3A-212ENST00000582122 PPP3CAQ08209 521 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 DPCR1Q3MIW9 517 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 CFAP221Q4G0U5 840 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 SLC39A12Q504Y0 691 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 VSTM1Q6UX27 236 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 RNF19BQ6ZMZ0 732 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 SPATA31D4Q6ZUB0 917 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 TRIM59Q8IWR1 403 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 OR6B3Q8NGW1 331 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 OR10T2Q8NGX3 314 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 SLC35C1Q96A29 364 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 EEF2KMTQ96G04 330 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 NIF3L1Q9GZT8 377 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 EHD2Q9NZN4 543 aa11.14□□□□□ -0.63
TOP3A-212ENST00000582122 ZMYM5Q9UJ78 669 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms