RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 SDHAF4Q5VUM1 108 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 HEATR6Q6AI08 1181 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PRR23BQ6ZRT6 265 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 SV2BQ7L1I2 683 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 NELL1Q92832 810 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 E2F7Q96AV8 911 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 DNAJC19Q96DA6 116 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 GCNAQ96QF7 691 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 ACCSQ96QU6 501 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 EPC1Q9H2F5 836 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 ST6GALNAC4Q9H4F1 302 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 IL21Q9HBE4 155 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 TMLHEQ9NVH6 421 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 C2orf42Q9NWW7 574 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 STK17AQ9UEE5 414 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 USP18Q9UMW8 372 aa12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 SRPRBQ9Y5M8 271 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 NUP210Q8TEM1 1887 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-223ENST00000582114 A0A087X0B3 334 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 IL18RAPO95256 599 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 FGF19O95750 216 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 ITGB3P05106 788 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 HAPLN1P10915 354 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 ACAT1P24752 427 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 CTHP32929 405 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 TXLNAP40222 546 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 STAT6P42226 847 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 CXCL12P48061 93 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 BFSP1Q12934 665 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 SRSF5Q13243 272 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PUM1Q14671 1186 aaKnown RBP eCLIP12.54□□□□□ -0.42e-9■■□□□ 12.1
CDK5RAP3-223ENST00000582114 PPP2R5DQ14738 602 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 L1TD1Q5T7N2 865 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 BPIFB1Q8TDL5 484 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 SECISBP2LQ93073 1101 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 HVCN1Q96D96 273 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 BORCS6Q96GS4 357 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 ZNF560Q96MR9 790 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 CBWD1Q9BRT8 395 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PI4K2AQ9BTU6 479 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 STRA6Q9BX79 667 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 SLC46A2Q9BY10 475 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 TASP1Q9H6P5 420 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 C8orf33Q9H7E9 229 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 RBAKQ9NYW8 714 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 MAGED2Q9UNF1 606 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 AGAP1Q9UPQ3 857 aa12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 KIF26AQ9ULI4 1882 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-223ENST00000582114 MYBPHLA2RUH7 354 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 CHURC1-FNTBB4DL54 471 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 HCRTO43612 131 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 KRT19P08727 400 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 GAP43P17677 238 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PDCP20941 246 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 SYT1P21579 422 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PAX3P23760 479 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 CDC25CP30307 473 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 FNTBP49356 437 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 NRLP54845 237 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 LRRC32Q14392 662 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 POSTNQ15063 836 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 CCDC142Q17RM4 750 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 ARHGAP29Q52LW3 1261 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 LMBRD2Q68DH5 695 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 TRIM68Q6AZZ1 485 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 BRSK2Q8IWQ3 736 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 DCP1BQ8IZD4 617 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PDCL2Q8N4E4 241 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PDILTQ8N807 584 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 MAB21L3Q8N8X9 362 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 C1orf127Q8N9H9 656 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 SPPL2BQ8TCT7 592 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 USP28Q96RU2 1077 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 FAM126AQ9BYI3 521 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PARD6AQ9NPB6 346 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 HSFX1Q9UBD0 423 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 SEL1LQ9UBV2 794 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 GMEB2Q9UKD1 530 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 RAB23Q9ULC3 237 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 L1RE1Q9UN81 338 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 EXOC7Q9UPT5 735 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 CCL26Q9Y258 94 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PCDHB5Q9Y5E4 795 aa12.53□□□□□ -0.4
CDK5RAP3-223ENST00000582114 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 TSPY1Q01534 308 aa12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 SPEM2Q0P670 501 aa12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 DDR2Q16832 855 aa12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 TXNDC8Q6A555 127 aa12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 CCDC73Q6ZRK6 1079 aa12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 TMEM150AQ86TG1 271 aa12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 RALGPS2Q86X27 583 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 SPEM1Q8N4L4 309 aa12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 CSGALNACT2Q8N6G5 542 aa12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 GLIS3Q8NEA6 775 aa12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 C2orf15Q8WU43 125 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-223ENST00000582114 HPS3Q969F9 1004 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms