RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 XYLT2Q9H1B5 865 aa13.31□□□□□ -0.28
SMARCD2-209ENST00000581832 GDE1Q9NZC3 331 aa13.31□□□□□ -0.28
SMARCD2-209ENST00000581832 MAPK8IP1Q9UQF2 711 aa13.31□□□□□ -0.28
SMARCD2-209ENST00000581832 MRPS23Q9Y3D9 190 aaKnown RBP13.31□□□□□ -0.28
SMARCD2-209ENST00000581832 ARIH1Q9Y4X5 557 aaPredicted RBP13.31□□□□□ -0.28
SMARCD2-209ENST00000581832 MYO15AQ9UKN7 3530 aa13.31□□□□□ -0.28
SMARCD2-209ENST00000581832 VPS13AQ96RL7 3174 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 TULP1O00294 542 aaPredicted RBP13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 MAPK13O15264 365 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 GADD45BO75293 160 aaPredicted RBP13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 VNN1O95497 513 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 HAPLN1P10915 354 aaPredicted RBP13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 NPR3P17342 541 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 FCARP24071 287 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 LMO2P25791 158 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 MYO1EQ12965 1108 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 CCDC142Q17RM4 750 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 COBLL1Q53SF7 1204 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 TDRD10Q5VZ19 366 aaKnown RBP13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 FAM171BQ6P995 826 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 GAREM2Q75VX8 874 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 DNAJB7Q7Z6W7 309 aaPredicted RBP13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 SMYD4Q8IYR2 804 aaPredicted RBP13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 FBXL6Q8N531 539 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 C2orf15Q8WU43 125 aaKnown RBP13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 ERCC4Q92889 916 aaPredicted RBP13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 MCRS1Q96EZ8 462 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 ZSWIM3Q96MP5 696 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 VRTNQ9H8Y1 702 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 ZNF334Q9HCZ1 680 aaPredicted RBP13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 DDX43Q9NXZ2 648 aaKnown RBP13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 PCDHA5Q9Y5H7 936 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 PIEZO1Q92508 2521 aa13.3□□□□□ -0.28
SMARCD2-209ENST00000581832 OBSL1O75147 1896 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 ANAPC1Q9H1A4 1944 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 ZNF197O14709 1029 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 CALUO43852 315 aaPredicted RBP13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 AKAP3O75969 853 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 FAM163BP0C2L3 166 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 SRFP11831 508 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 GJA1P17302 382 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 WARSP23381 471 aaKnown RBP13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 ACAT1P24752 427 aaKnown RBP13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 LHX1P48742 406 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 TUFMP49411 452 aaKnown RBP13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 EPHB3P54753 998 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 MYL6P60660 151 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 INTS6LQ5JSJ4 861 aaKnown RBP13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 IER5LQ5T953 404 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 IQCEQ6IPM2 695 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 PDZD4Q76G19 769 aaPredicted RBP13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 DCP1BQ8IZD4 617 aaKnown RBP13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 ADGRF2Q8IZF7 708 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 LEMD2Q8NC56 503 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 SPPL2BQ8TCT7 592 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 TMC2Q8TDI7 906 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 GSDMAQ96QA5 445 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 PLA2G2FQ9BZM2 168 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 ASAH2Q9NR71 780 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 SLC2A4RGQ9NR83 387 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 WNT16Q9UBV4 365 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 GTF3C4Q9UKN8 822 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 ASB3Q9Y575 518 aa13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 ZNF638Q14966 1978 aaKnown RBP13.29□□□□□ -0.28
SMARCD2-209ENST00000581832 CACNA1IQ9P0X4 2223 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 MYBPHLA2RUH7 354 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 KRBA1A5PL33 1030 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 GOLGA6L4A6NEF3 574 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 IKBKBO14920 756 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 ATP2C2O75185 946 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 TACC1O75410 805 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 KIF20AO95235 890 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 AVPR2P30518 371 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 PRCPP42785 496 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 ALDH1A3P47895 512 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 VCPP55072 806 aaKnown RBP13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 PLD1Q13393 1074 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 ZACNQ401N2 412 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 FAM78AQ5JUQ0 283 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 CYP4A22Q5TCH4 519 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 TANGO2Q6ICL3 276 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 MTSS1LQ765P7 747 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 TMEM150AQ86TG1 271 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 ELMOD1Q8N336 334 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 CCDC47Q96A33 483 aaKnown RBP13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 ASB16Q96NS5 453 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 LPIN3Q9BQK8 851 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 MRPL45Q9BRJ2 306 aaKnown RBP13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 TRPV4Q9HBA0 871 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 IL21Q9HBE4 155 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 CRTAC1Q9NQ79 661 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 PCDHB5Q9Y5E4 795 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 NCANO14594 1321 aa13.28□□□□□ -0.28
SMARCD2-209ENST00000581832 ECI2O75521 394 aa13.27□□□□□ -0.29
SMARCD2-209ENST00000581832 CFHP08603 1231 aa13.27□□□□□ -0.29
SMARCD2-209ENST00000581832 MYL4P12829 197 aa13.27□□□□□ -0.29
SMARCD2-209ENST00000581832 HMGA1P17096 107 aaKnown RBP13.27□□□□□ -0.29
SMARCD2-209ENST00000581832 NR2F2P24468 414 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms